RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 LRRC52Q8N7C0 313 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CT45A3Q8NHU0 189 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 LINC01599Q8WXQ3 324 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 HRH4Q9H3N8 390 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SUV39H2Q9H5I1 410 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 MOB1AQ9H8S9 216 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PDE7BQ9NP56 450 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ACTR3BQ9P1U1 418 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CACNG4Q9UBN1 327 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GPR34Q9UPC5 381 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ROBO2Q9HCK4 1378 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SH2D7A6NKC9 451 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ABCB7O75027 752 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SIX3O95343 332 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PAHP00439 452 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 TFP02787 698 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CD48P09326 243 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PYCR1P32322 319 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GGT5P36269 586 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 UBE2KP61086 200 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ACTA2P62736 377 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ACTG2P63267 376 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ARG2P78540 354 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 BAXQ07812 192 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF630Q2M218 657 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 METTL2BQ6P1Q9 378 aaKnown RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 TMEM53Q6P2H8 277 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PAQR3Q6TCH7 311 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SSX7Q7RTT5 188 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CCDC116Q8IYX3 515 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PLD5Q8N7P1 536 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 OR4K14Q8NGD5 310 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SMPDL3AQ92484 453 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SPTSSAQ969W0 71 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 TRMT2BQ96GJ1 504 aaKnown RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 RBM24Q9BX46 236 aaKnown RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 HRASLSQ9HDD0 168 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 XPNPEP1Q9NQW7 623 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GLTPQ9NZD2 209 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 COL20A1Q9P218 1284 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 OR14J1Q9UGF5 321 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 VSTM2BA6NLU5 285 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 AQP12BA6NM10 295 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 LOC730098B7Z3J9 87 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 AQP7O14520 342 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 KDELR3O43731 214 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ONECUT3O60422 494 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 POP7O75817 140 aaKnown RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SLC22A5O76082 557 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SHMT1P34896 483 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 DUSP3P51452 185 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 MRPS34P82930 218 aaKnown RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GTF2BQ00403 316 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SLAMF1Q13291 335 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SLC14A1Q13336 389 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 POU4F3Q15319 338 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SLC14A2Q15849 920 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PHYHD1Q5SRE7 291 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 MBLAC2Q68D91 279 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 AQP12AQ8IXF9 295 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 OR52E2Q8NGJ4 325 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FNDC9Q8TBE3 224 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 DIO2Q92813 273 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 BIRC7Q96CA5 298 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 EBF4Q9BQW3 602 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ZBTB20Q9HC78 741 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 DERAQ9Y315 318 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 TMED5Q9Y3A6 229 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 HCN4Q9Y3Q4 1203 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CFAP65Q6ZU64 1925 aaKnown RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 TRPM3Q9HCF6 1732 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FMN2Q9NZ56 1722 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 NPIPA5A0A0B4J1W7 369 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 DVL2O14641 736 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 CHRNA1P02708 482 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 HOXD8P13378 290 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 UGT2B7P16662 529 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PGCP20142 388 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 IMPDH1P20839 514 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ETV4P43268 484 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GALNT1Q10472 559 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 POU4F2Q12837 409 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GPM6BQ13491 265 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GRM2Q14416 872 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PKDCCQ504Y2 493 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF648Q5T619 568 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 MEDAGQ5VYS4 303 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 PLCXD3Q63HM9 321 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FAM180BQ6P0A1 224 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FAM111BQ6SJ93 734 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 NPAS4Q8IUM7 802 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 OR4N2Q8NGD1 307 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 OR5AK2Q8NH90 309 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 UHRF1Q96T88 793 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FAM103A1Q9BTL3 118 aaKnown RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 SDCBP2Q9H190 292 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 MEPEQ9NQ76 525 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-210ENST00000471181 MYOTQ9UBF9 498 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 FZD10Q9ULW2 581 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms