RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 PRKNO60260 465 aaPredicted RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 NPHS1O60500 1241 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 TMCC2O75069 709 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 CHRNGP07510 517 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 HIST1H2AGP0C0S8 130 aaPredicted RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 CDH1P12830 882 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 HIST1H2ADP20671 130 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 ENDOUP21128 410 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 CALRP27797 417 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 AHRP35869 848 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 SERPINB5P36952 375 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 NUDT2P50583 147 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 AGFG1P52594 562 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 DIO3P55073 304 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 MTTPP55157 894 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 RAB10P61026 200 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 SLC13A2Q13183 592 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 CYLC2Q14093 348 aaPredicted RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 ELAVL1Q15717 326 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 GRAMD1BQ3KR37 738 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 LSM12Q3MHD2 195 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 TCHHL1Q5QJ38 904 aaPredicted RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 LPCAT4Q643R3 524 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 SCIMPQ6UWF3 145 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 HIPK1Q86Z02 1210 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 DND1Q8IYX4 353 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 ST13P4Q8IZP2 240 aaPredicted RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 MEIOBQ8N635 442 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 CCNYL1Q8N7R7 359 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 GABPB2Q8TAK5 448 aaPredicted RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 UTP15Q8TED0 518 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 LPGAT1Q92604 370 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 NXNL1Q96CM4 212 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 HIST1H2AHQ96KK5 128 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 PPP1R36Q96LQ0 422 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 ZFP3Q96NJ6 502 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 TRIB1Q96RU8 372 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 SLC30A3Q99726 388 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 HIST1H2AJQ99878 128 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 MCMBPQ9BTE3 642 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 H2AFJQ9BTM1 129 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 NPLQ9BXD5 320 aaPredicted RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 FAM192AQ9GZU8 254 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 WDR55Q9H6Y2 383 aaPredicted RBP8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 ZNF226Q9NYT6 803 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 CNIH4Q9P003 139 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 XPR1Q9UBH6 696 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 CAMK2AQ9UQM7 478 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 POMPQ9Y244 141 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 ACOT9Q9Y305 439 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 DTNAQ9Y4J8 743 aa8.17□□□□□ -1.1
SYNGAP1-205ENST00000470232 TRPC5OSA6NMA1 111 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 CFLARO15519 480 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 DLX3O60479 287 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 VAPBO95292 243 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 B3GALT4O96024 378 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 FESP07332 822 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 TMIGD3P0DMS9 266 aaPredicted RBP8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 CCL3P10147 92 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 UQCRBP14927 111 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 NPPBP16860 134 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 STMN1P16949 149 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 TNNI3P19429 210 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 OGNP20774 298 aaKnown RBP8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 ZNF10P21506 573 aaPredicted RBP8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 EPHA3P29320 983 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 PIGAP37287 484 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 TRPC1P48995 793 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 PTH2RP49190 550 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 CLCN7P51798 805 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 NAGLUP54802 743 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 RAB8AP61006 207 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 DUSP8Q13202 625 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 NAE1Q13564 534 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 RCAN2Q14206 197 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 PDCD2Q16342 344 aaPredicted RBP8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 CHRFAM7AQ494W8 412 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 ARL13AQ5H913 290 aaPredicted RBP8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 RNF220Q5VTB9 566 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 AGTRAPQ6RW13 159 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 PLEKHM3Q6ZWE6 761 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 DENND6AQ8IWF6 608 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 CNTN4Q8IWV2 1026 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 ZNF595Q8IYB9 648 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 CA13Q8N1Q1 262 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 LRRC25Q8N386 305 aaPredicted RBP8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 SLC15A4Q8N697 577 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 ICA1LQ8NDH6 482 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 ABHD11Q8NFV4 315 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 OR4K1Q8NGD4 311 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 OR14A16Q8NHC5 309 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 RP9Q8TA86 221 aaKnown RBP8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 RCN3Q96D15 328 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 JSRP1Q96MG2 331 aaPredicted RBP8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 TIMP4Q99727 224 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 CENPKQ9BS16 269 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 SFXN3Q9BWM7 321 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 NUF2Q9BZD4 464 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 AMBRA1Q9C0C7 1298 aa8.16□□□□□ -1.1
SYNGAP1-205ENST00000470232 SLC6A15Q9H2J7 730 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms