RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 IL3P08700 152 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 CYP4B1P13584 511 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 CD99P14209 185 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 CPN1P15169 458 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 IMPDH1P20839 514 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 GCAP28676 217 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 KRT6CP48668 564 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 DGKQP52824 942 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 RAE1P78406 368 aaKnown RBP12.09□□□□□ -0.47
CPSF4-210ENST00000469897 BTKQ06187 659 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 FOXF2Q12947 444 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 SNTA1Q13424 505 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 DAZAP2Q15038 168 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-210ENST00000469897 CEBPEQ15744 281 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 FBXL19-AS1Q494R0 122 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 FLYWCH1Q4VC44 716 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 ZNF628Q5EBL2 1059 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 OR5M10Q6IEU7 315 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 TMEM81Q6P7N7 255 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 SCIMPQ6UWF3 145 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 TIFABQ6ZNK6 161 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 C9orf106Q8NAJ2 232 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 MBD3L2Q8NHZ7 208 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-210ENST00000469897 ZPLD1Q8TCW7 415 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 TMCO6Q96DC7 493 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 APIPQ96GX9 242 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 COL21A1Q96P44 957 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 ADOQ96SZ5 270 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 FOXC2Q99958 501 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 TUBA1CQ9BQE3 449 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 OSBPL11Q9BXB4 747 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 ST6GALNAC2Q9UJ37 374 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 MCM8Q9UJA3 840 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-210ENST00000469897 PLEKHA6Q9Y2H5 1048 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 TIMM22Q9Y584 194 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 EXOC1LA0A1B0GW35 172 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 GNG14A0A1W2PPG7 69 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 PRAMEF25A6NGN4 478 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 FRG2CA6NGY1 282 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 TUBAL3A6NHL2 446 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 EEF1E1-BLOC1S5C9J1V9 151 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 TO15178 435 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 EEF1E1O43324 174 aaKnown RBP12.08□□□□□ -0.48
CPSF4-210ENST00000469897 BCAS2O75934 225 aaPredicted RBP12.08□□□□□ -0.48
CPSF4-210ENST00000469897 CTAGE8P0CG41 777 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 TMIGD3P0DMS9 266 aaPredicted RBP12.08□□□□□ -0.48
CPSF4-210ENST00000469897 HSD3B1P14060 373 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 DRD2P14416 443 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 TACR1P25103 407 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 HSD3B2P26439 372 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 HMOX2P30519 316 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 OPRM1P35372 400 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 GCKP35557 465 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 HTR6P50406 440 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 CORO7P57737 925 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 HMGCS1Q01581 520 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 CSTF3Q12996 717 aaKnown RBP12.08□□□□□ -0.48
CPSF4-210ENST00000469897 RCAN2Q14206 197 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 RASA2Q15283 850 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 GLE1Q53GS7 698 aaKnown RBP12.08□□□□□ -0.48
CPSF4-210ENST00000469897 GPRIN3Q6ZVF9 776 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 PLCZ1Q86YW0 608 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 CTAGE4Q8IX94 777 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 OR9A2Q8NGT5 310 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 C16orf78Q8WTQ4 265 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 NINJ1Q92982 152 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 EXOSC8Q96B26 276 aaKnown RBP12.08□□□□□ -0.48
CPSF4-210ENST00000469897 RMND5BQ96G75 393 aaPredicted RBP12.08□□□□□ -0.48
CPSF4-210ENST00000469897 TMEM237Q96Q45 408 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 ACPTQ9BZG2 426 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 CXXC4Q9H2H0 198 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 TAS2R10Q9NYW0 307 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 NFU1Q9UMS0 254 aa12.08□□□□□ -0.48
CPSF4-210ENST00000469897 OR6C70A6NIJ9 312 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 GOLGA8RI6L899 631 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 PCDH7O60245 1069 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 RHOXF2BP0C7M4 288 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 CT45A8P0DMV1 189 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 CT45A9P0DMV2 189 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 EPXP11678 715 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 ATP5F1P24539 256 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-210ENST00000469897 DNASE1P24855 282 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 HEPACAMQ14CZ8 416 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 CT45A2Q5DJT8 189 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 FBXW10Q5XX13 1052 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 ENPP6Q6UWR7 440 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 KIF18BQ86Y91 864 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 GBP7Q8N8V2 638 aaPredicted RBP12.07□□□□□ -0.48
CPSF4-210ENST00000469897 CCDC168Q8NDH2 2452 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 MNS1Q8NEH6 495 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 OR4N2Q8NGD1 307 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 INTS12Q96CB8 462 aaKnown RBP12.07□□□□□ -0.48
CPSF4-210ENST00000469897 MTBPQ96DY7 904 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 KCNA7Q96RP8 456 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 ZNF382Q96SR6 550 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 EBPLQ9BY08 206 aa12.07□□□□□ -0.48
CPSF4-210ENST00000469897 SLC35C2Q9NQQ7 365 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms