RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 B3GALT5-AS1P59052 145 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 RPS3AP61247 264 aaKnown RBP9.14□□□□□ -0.95
HDAC3-203ENST00000467533 IRF9Q00978 393 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 SPA17Q15506 151 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 TSC22D1Q15714 1073 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 TAB1Q15750 504 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 SGCBQ16585 318 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 OR5M10Q6IEU7 315 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 GALNT12Q8IXK2 581 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 C17orf47Q8NEP4 570 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 OR4K17Q8NGC6 315 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 KAT2AQ92830 837 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 CALR3Q96L12 384 aaKnown RBP9.14□□□□□ -0.95
HDAC3-203ENST00000467533 FAM167BQ9BTA0 163 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 PRR14Q9BWN1 585 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 SORBS1Q9BX66 1292 aaKnown RBP9.14□□□□□ -0.95
HDAC3-203ENST00000467533 MS4A8Q9BY19 250 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 OR10A5Q9H207 317 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 ZNF696Q9H7X3 374 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 IARS2Q9NSE4 1012 aaKnown RBP9.14□□□□□ -0.95
HDAC3-203ENST00000467533 IKZF3Q9UKT9 509 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 A0A0A6YYJ9 748 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 ZCWPW2A0A1B0GU75 182 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 TCRBV7S3A2A0A539 114 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 ESYT3A0FGR9 886 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 NPEPPSL1A6NEC2 478 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 GLOD5A6NK44 160 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 SLCO1B7G3V0H7 640 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 TMPRSS2O15393 492 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 SS18L1O75177 396 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-203ENST00000467533 UGT2B11O75310 529 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 EPB42P16452 691 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 TPSB2P20231 275 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 GPX3P22352 226 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 ADH6P28332 368 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 SUCLG1P53597 346 aaKnown RBP9.13□□□□□ -0.95
HDAC3-203ENST00000467533 PGGT1BP53609 377 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 HNRNPH2P55795 449 aaKnown RBP9.13□□□□□ -0.95
HDAC3-203ENST00000467533 CLDN20P56880 219 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 CDK16Q00536 496 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 HMGCS1Q01581 520 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 TPSAB1Q15661 275 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 PPP1R3AQ16821 1122 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 C18orf21Q32NC0 220 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-203ENST00000467533 HSP90AA5PQ58FG0 334 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 DEPDC1Q5TB30 811 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 ARMC3Q5W041 872 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 C11orf71Q6IPW1 123 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 FIGNL1Q6PIW4 674 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 FRA10AC1Q70Z53 315 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 PEX26Q7Z412 305 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 GPR180Q86V85 440 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 ZNF615Q8N8J6 731 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 SNX31Q8N9S9 440 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 ADCY4Q8NFM4 1077 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 GMPPAQ96IJ6 420 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-203ENST00000467533 PIMREGQ9BSJ6 248 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 BHLHE41Q9C0J9 482 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-203ENST00000467533 C12orf49Q9H741 205 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 FOLH1BQ9HBA9 442 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 CBLN4Q9NTU7 201 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 XPR1Q9UBH6 696 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 METRNQ9UJH8 293 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 ZNF490Q9ULM2 529 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-203ENST00000467533 MRPS18CQ9Y3D5 142 aaKnown RBP9.13□□□□□ -0.95
HDAC3-203ENST00000467533 NOTCH1P46531 2555 aa9.13□□□□□ -0.95
HDAC3-203ENST00000467533 DPRXA6NFQ7 191 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 WASHC1A8K0Z3 465 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 MIF4GDA9UHW6 222 aaKnown RBP9.12□□□□□ -0.95
HDAC3-203ENST00000467533 SHISA9B4DS77 424 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 ZIC3O60481 467 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 LY6HO94772 140 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 AIFM1O95831 613 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 CT62P0C5K7 136 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 NR2F6P10588 404 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 HK1P19367 917 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 GALNSP34059 522 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 HNMTP50135 292 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 RAP1GDS1P52306 607 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 DSCR4P56555 118 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-203ENST00000467533 SARNPP82979 210 aaKnown RBP9.12□□□□□ -0.95
HDAC3-203ENST00000467533 TMEM35AQ53FP2 167 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 SEL1L2Q5TEA6 688 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 SEZ6L2Q6UXD5 910 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 C4orf22Q6V702 233 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 GSTA5Q7RTV2 222 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 CCDC25Q86WR0 208 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 CNGA4Q8IV77 575 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 LRRC17Q8N6Y2 441 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 GBP7Q8N8V2 638 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-203ENST00000467533 LRRC57Q8N9N7 239 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 HSD17B8Q92506 261 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 TMCO6Q96DC7 493 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 PTCD3Q96EY7 689 aaKnown RBP9.12□□□□□ -0.95
HDAC3-203ENST00000467533 SERPINB12Q96P63 405 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 CAPS2Q9BXY5 557 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 ITPAQ9BY32 194 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 POTEKPQ9BYX7 375 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 CXorf21Q9HAI6 301 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 GPRC5BQ9NZH0 403 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms