RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TMEM220Q6QAJ8 160 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 ZNF730Q6ZMV8 503 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 RNF165Q6ZSG1 346 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 PTOV1Q86YD1 416 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 DNAJC5GQ8N7S2 189 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 OR4K1Q8NGD4 311 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 OR2T4Q8NH00 348 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 WDR20Q8TBZ3 569 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 TMEM163Q8TC26 289 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 OTUB1Q96FW1 271 aaPredicted RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 KCTD7Q96MP8 289 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 PKP4Q99569 1192 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 C1QTNF6Q9BXI9 259 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 CD93Q9NPY3 652 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 SLCO1C1Q9NYB5 712 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 HCN3Q9P1Z3 774 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 COMMD3Q9UBI1 195 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 ZNF451Q9Y4E5 1061 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 ASB4Q9Y574 426 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 A8MXK9 166 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 WWP2O00308 870 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 KPNA3O00505 521 aaPredicted RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 RHOP08100 348 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 CKMT1AP12532 417 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 SLC6A1P30531 599 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 VIPR1P32241 457 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 AGFG1P52594 562 aaKnown RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 C2orf80Q0P641 193 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 TMEM115Q12893 351 aaPredicted RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 MLLT11Q13015 90 aaPredicted RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.323e-7■□□□□ 10.9
SNAPC3-205ENST00000467062 HENMT1Q5T8I9 393 aaKnown RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 PTCHD4Q6ZW05 846 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 NELL1Q92832 810 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 LRRC3BQ96PB8 259 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 TMEM121BQ9BXQ6 578 aaPredicted RBP17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 MALT1Q9UDY8 824 aa17.06■□□□□ 0.32
SNAPC3-205ENST00000467062 GNG14A0A1W2PPG7 69 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 M0R129 80 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 ADAMDEC1O15204 470 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 SLCO2B1O94956 709 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 APOL3O95236 402 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 MPC1LP0DKB6 136 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 ACPPP15309 386 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 IMPA1P29218 277 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 CSTF1Q05048 431 aaKnown RBP17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 ZNF91Q05481 1191 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 P2RY14Q15391 338 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 CCDC85BQ15834 202 aaPredicted RBP17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 ETFDHQ16134 617 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 TCEAL5Q5H9L2 206 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 MEDAGQ5VYS4 303 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 PDZD3Q86UT5 571 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 HUS1BQ8NHY5 278 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 NEIL2Q969S2 332 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 SCMH1Q96GD3 660 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 C7orf34Q96L11 122 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 MRGPRX3Q96LB0 322 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 C19orf43Q9BQ61 176 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 GHITMQ9H3K2 345 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 GULP1Q9UBP9 304 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 PFDN2Q9UHV9 154 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 PRKAB1Q9Y478 270 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 VCANP13611 3396 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 OBSL1O75147 1896 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 PLXNB3Q9ULL4 1909 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 OPN1SWP03999 348 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 ANXA4P09525 319 aaPredicted RBP17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 RAE1P78406 368 aaKnown RBP17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 LTB4RQ15722 352 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 C22orf42Q6IC83 251 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 KIAA0907Q7Z7F0 614 aaPredicted RBP17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 TMPRSS11BQ86T26 416 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 CDH26Q8IXH8 852 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 TPT1P8Q9HAU6 139 aa17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 GOLGA4Q13439 2230 aaKnown RBP17.05■□□□□ 0.32
SNAPC3-205ENST00000467062 ELFN1P0C7U0 828 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 LINC00271P0C7V0 271 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 RPS13P62277 151 aaKnown RBP17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 MC1RQ01726 317 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 RPL6Q02878 288 aaKnown RBP17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 CAMK2DQ13557 499 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 TSC22D1Q15714 1073 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 NHLRC3Q5JS37 347 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 CDKL4Q5MAI5 379 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 ZNF852Q6ZMS4 543 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 CFAP206Q8IYR0 622 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 CSGALNACT1Q8TDX6 532 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 OR2M2Q96R28 347 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 SLC19A3Q9BZV2 496 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 OR51J1Q9H342 316 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 KLHL42Q9P2K6 505 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 PPM1AP35813 382 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 EVX1P49640 407 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 GAB1Q13480 694 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 LIPKQ5VXJ0 399 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 FRMPD2BQ6IN97 320 aa17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 GRASPQ7Z6J2 395 aaPredicted RBP17.04■□□□□ 0.32
SNAPC3-205ENST00000467062 C12orf40Q86WS4 652 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms