RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 FXYD1O00168 92 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 ASNA1O43681 348 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 NKX2-2O95096 273 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 GSNP06396 782 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 CT45A8P0DMV1 189 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 CT45A9P0DMV2 189 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 CHI3L1P36222 383 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 MAN2A2P49641 1150 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 ANXA11P50995 505 aaKnown RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 PRKAG1P54619 331 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 ZNF155Q12901 538 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 TP53BP2Q13625 1128 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 LASP1Q14847 261 aaKnown RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 TBR1Q16650 682 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 MEP1AQ16819 746 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 CT45A2Q5DJT8 189 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 PIGGQ5H8A4 983 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 AGAP7PQ5VUJ5 663 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 TCTN3Q6NUS6 607 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 IGFL2Q6UWQ7 119 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 SZRD1Q7Z422 152 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 DND1Q8IYX4 353 aaKnown RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 POU5F2Q8N7G0 328 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 FDCSPQ8NFU4 85 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 RCN3Q96D15 328 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 SLC35G5Q96KT7 338 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 ANKRD27Q96NW4 1050 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 AGAP4Q96P64 663 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 LMF1Q96S06 567 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 CGREF1Q99674 301 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 SMAD5Q99717 465 aaKnown RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 NPAS2Q99743 824 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 RNF32Q9H0A6 362 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 RAD21L1Q9H4I0 556 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 ZNF552Q9H707 407 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 TPT1P8Q9HAU6 139 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 GPR83Q9NYM4 423 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 SLAMF8Q9P0V8 285 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 TUBD1Q9UJT1 453 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 FAF1Q9UNN5 650 aaPredicted RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 YARS2Q9Y2Z4 477 aaKnown RBP14.06□□□□□ -0.16
NPHP4-205ENST00000466897 PCDHGB7Q9Y5F8 929 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 ZZEF1O43149 2961 aa14.06□□□□□ -0.16
NPHP4-205ENST00000466897 CLIC1O00299 241 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 AGR2O95994 175 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 ALPPP05187 535 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 TRHRP34981 398 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-205ENST00000466897 CCL11P51671 97 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 MNAT1P51948 309 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 MVDP53602 400 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 FADDQ13158 208 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 MFAP5Q13361 173 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 GTDC1Q4AE62 458 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 CYP27C1Q4G0S4 372 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 RUNDC3AQ59EK9 446 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 ACER2Q5QJU3 275 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 ISLR2Q6UXK2 745 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 HPS6Q86YV9 775 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 TAGAPQ8N103 731 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 SIRT6Q8N6T7 355 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 AMER2Q8N7J2 671 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 OR8J3Q8NGG0 315 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 OR52N2Q8NGI0 321 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 SLC22A8Q8TCC7 542 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 LRRC58Q96CX6 371 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 GAL3ST4Q96RP7 486 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 CPPED1Q9BRF8 314 aaPredicted RBP14.05□□□□□ -0.16
NPHP4-205ENST00000466897 NXF5Q9H1B4 397 aaKnown RBP14.05□□□□□ -0.16
NPHP4-205ENST00000466897 PIGUQ9H490 435 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 Q9N2J8 555 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 EQTNQ9NQ60 294 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 ARL8BQ9NVJ2 186 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 THUMPD1Q9NXG2 353 aaKnown RBP14.05□□□□□ -0.16
NPHP4-205ENST00000466897 ABI3Q9P2A4 366 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 MGAQ8IWI9 3026 aa14.05□□□□□ -0.16
NPHP4-205ENST00000466897 C15orf38-AP3S2A0A0A6YYH1 394 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 CCT8L1PA6NM43 557 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 A8MUI8 341 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 MKRN2OSH3BPM6 223 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 ITGA10O75578 1167 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 NADKO95544 446 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-205ENST00000466897 ALOX5P09917 674 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 ACP2P11117 423 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 BMP2P12643 396 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 NAGAP17050 411 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 GPX2P18283 190 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 MATN1P21941 496 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 CALB2P22676 271 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 KHKP50053 298 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 NRG3P56975 720 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 RHDQ02161 417 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 ABHD17BQ5VST6 288 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 C8orf82Q6P1X6 216 aaPredicted RBP14.04□□□□□ -0.16
NPHP4-205ENST00000466897 NPSR1Q6W5P4 371 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 ARPINQ7Z6K5 226 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 GPALPP1Q8IXQ4 340 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 CLEC4FQ8N1N0 589 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 SLC16A11Q8NCK7 471 aa14.04□□□□□ -0.16
NPHP4-205ENST00000466897 RASL10BQ96S79 203 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms