RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 SPATA21Q7Z572 469 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF554Q86TJ5 538 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ASPGQ86U10 573 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ISCA2Q86U28 154 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 FBXO39Q8N4B4 442 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ADAD2Q8NCV1 583 aaKnown RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 BPIFCQ8NFQ6 507 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 KBTBD8Q8NFY9 601 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 TSPAN14Q8NG11 270 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 OR10T2Q8NGX3 314 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 WDR20Q8TBZ3 569 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 RLN3Q8WXF3 142 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 PIGBQ92521 554 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 LPGAT1Q92604 370 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ESAMQ96AP7 390 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 KIAA1143Q96AT1 154 aaPredicted RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 RPGRIP1Q96KN7 1286 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 LRR1Q96L50 414 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 FAM20AQ96MK3 541 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 NPY6RQ99463 290 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 RTP3Q9BQQ7 232 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ACBD6Q9BR61 282 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 C11orf70Q9BRQ4 267 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 TDRD1Q9BXT4 1180 aaKnown RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 PPIL3Q9H2H8 161 aaKnown RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 MINDY3Q9H8M7 445 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 SRD5A3Q9H8P0 318 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 SIX2Q9NPC8 291 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 EURLQ9NYK6 297 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 UBQLN2Q9UHD9 624 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 IL20RAQ9UHF4 553 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 CRLS1Q9UJA2 301 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF148Q9UQR1 794 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 KIF15Q9NS87 1388 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 NRXN1Q9ULB1 1477 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 RGPD5Q99666 1765 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ASTN2O75129 1339 aaPredicted RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 NAIPQ13075 1403 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 KCPQ6ZWJ8 1503 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 SMCHD1A6NHR9 2005 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 ERICH2A1L162 156 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 TMEM221A6NGB7 291 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 PSMD11O00231 422 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 NDUFS6O75380 124 aaKnown RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 TRMUO75648 421 aaKnown RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 RHOBTB1O94844 696 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 ERLIN2O94905 339 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 SNAI1O95863 264 aaPredicted RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 RNF224P0DH78 156 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 UMPSP11172 480 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 F3P13726 295 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 RPA2P15927 270 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 CCND3P30281 292 aaPredicted RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 RRM2P31350 389 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 TRIM23P36406 574 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 CNN1P51911 297 aaKnown RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 CDH13P55290 713 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 TSPAN5P62079 268 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 POLR2GP62487 172 aaKnown RBP eCLIP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 GNB1P62873 340 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 FUT7Q11130 342 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 SLAQ13239 276 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 UGP2Q16851 508 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 RGS21Q2M5E4 152 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 HSDL1Q3SXM5 330 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 LBHQ53QV2 105 aaPredicted RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF311Q5JNZ3 666 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 TMEM211Q6ICI0 200 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 PMF1Q6P1K2 205 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 CASC4Q6P4E1 433 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 DLEU7Q6UYE1 221 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 BHLHA15Q7RTS1 189 aaPredicted RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 LDB1Q86U70 411 aaPredicted RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 APLFQ8IW19 511 aaPredicted RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF595Q8IYB9 648 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 KATNAL2Q8IYT4 538 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF383Q8NA42 475 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 FAM71CQ8NEG0 241 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 OR1J1Q8NGS3 322 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 UBA3Q8TBC4 463 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 DQX1Q8TE96 717 aaKnown RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 MITD1Q8WV92 249 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 HEXDCQ8WVB3 486 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 ASZ1Q8WWH4 475 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 SLCO4A1Q96BD0 722 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 TRNT1Q96Q11 434 aaKnown RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 ALS2CR12Q96Q35 445 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 PANX3Q96QZ0 392 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 OR6C1Q96RD1 312 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 RBM4BQ9BQ04 359 aaKnown RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 MRPL13Q9BYD1 178 aaKnown RBP3.19□□□□□ -1.9
CCDC58-203ENST00000466854 POTEKPQ9BYX7 375 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 SHCBP1LQ9BZQ2 653 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 PKIBQ9C010 78 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 FAM192AQ9GZU8 254 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 SPATC1LQ9H0A9 340 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 MAGT1Q9H0U3 335 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 KCNK15Q9H427 330 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 FBXO44Q9H4M3 255 aa3.19□□□□□ -1.9
CCDC58-203ENST00000466854 AUNIPQ9H7T9 357 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms