RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 DUSP15Q9H1R2 295 aaPredicted RBP17.11■□□□□ 0.33
COL9A3-205ENST00000466192 RNF6Q9Y252 685 aa17.11■□□□□ 0.33
COL9A3-205ENST00000466192 CACNA1EQ15878 2313 aa17.11■□□□□ 0.33
COL9A3-205ENST00000466192 PI4KAP42356 2102 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 M0R3H8 397 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 ASNA1O43681 348 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 FAM20BO75063 409 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 GASTP01350 101 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 GGT2P36268 569 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 IDH2P48735 452 aaKnown RBP17.1■□□□□ 0.33
COL9A3-205ENST00000466192 AFF3P51826 1226 aaKnown RBP17.1■□□□□ 0.33
COL9A3-205ENST00000466192 C21orf59P57076 290 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 GNA13Q14344 377 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 ZNF628Q5EBL2 1059 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 MFSD12Q6NUT3 480 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 TSSK4Q6SA08 328 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 OR2L13Q8N349 312 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 SDR16C5Q8N3Y7 309 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 DOK4Q8TEW6 326 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 SLC35A4Q96G79 324 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 TCTN2Q96GX1 697 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 QRSL1Q9H0R6 528 aaKnown RBP17.1■□□□□ 0.33
COL9A3-205ENST00000466192 DUSP21Q9H596 190 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 ANKHQ9HCJ1 492 aa17.1■□□□□ 0.33
COL9A3-205ENST00000466192 UNC13CQ8NB66 2214 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 A0A0G2JPF8 293 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 A8MVJ9 347 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 HNRNPCL2B2RXH8 293 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 HNRNPCL3B7ZW38 293 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 MAN1A2O60476 641 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 INMTO95050 263 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 EPPINO95925 133 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 HNRNPCL4P0DMR1 293 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 CBLP22681 906 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 PPM1FP49593 454 aaPredicted RBP17.09■□□□□ 0.33
COL9A3-205ENST00000466192 TUBA3CQ13748 450 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 TRMT12Q53H54 448 aaKnown RBP17.09■□□□□ 0.33
COL9A3-205ENST00000466192 SLC16A11Q8NCK7 471 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 CNDP2Q96KP4 475 aaKnown RBP17.09■□□□□ 0.33
COL9A3-205ENST00000466192 TGM7Q96PF1 710 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 MS4A4EQ96PG1 132 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 SLC38A1Q9H2H9 487 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 WARS2Q9UGM6 360 aaKnown RBP17.09■□□□□ 0.33
COL9A3-205ENST00000466192 MUTYHQ9UIF7 546 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 SPEGQ15772 3267 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 SRPX2O60687 465 aaPredicted RBP17.09■□□□□ 0.33
COL9A3-205ENST00000466192 GPR75O95800 540 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 NKAIN2Q5VXU1 208 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 MUL1Q969V5 352 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 BTBD2Q9BX70 525 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 DNAAF2Q9NVR5 837 aaKnown RBP17.09■□□□□ 0.33
COL9A3-205ENST00000466192 CLCA2Q9UQC9 943 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 PCDHGA10Q9Y5H3 936 aa17.09■□□□□ 0.33
COL9A3-205ENST00000466192 MUC3AQ02505 3323 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 IGHV5-51A0A0C4DH38 117 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 A0A1B0GVT2 93 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 NOL3O60936 208 aaKnown RBP17.08■□□□□ 0.33
COL9A3-205ENST00000466192 ATP1B1P05026 303 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 GABRA4P48169 554 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 RAB38P57729 211 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 CHRNEQ04844 493 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 PIN1Q13526 163 aaPredicted RBP17.08■□□□□ 0.33
COL9A3-205ENST00000466192 SEC23BQ15437 767 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 WDR45BQ5MNZ6 344 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 FHL5Q5TD97 284 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 PRAMEF8Q5VWM4 474 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 PRAMEF7Q5VXH5 474 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 ZNF770Q6IQ21 691 aaPredicted RBP17.08■□□□□ 0.33
COL9A3-205ENST00000466192 KLHL17Q6TDP4 642 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 P3H2Q8IVL5 708 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 ADAMTS15Q8TE58 950 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 TANKQ92844 425 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 ZG16BQ96DA0 208 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 PSD2Q9BQI7 771 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 SPATA5L1Q9BVQ7 753 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 GIN1Q9NXP7 522 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 PTGFRNQ9P2B2 879 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 TMCC3Q9ULS5 477 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 LIPT1Q9Y234 373 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 RNF215Q9Y6U7 377 aa17.08■□□□□ 0.33
COL9A3-205ENST00000466192 A0A0A6YYC8 382 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-205ENST00000466192 A0A1W2PPW3 197 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 I3L1I5 382 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-205ENST00000466192 CHST10O43529 356 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 H1F0P07305 194 aaKnown RBP17.08■□□□□ 0.32
COL9A3-205ENST00000466192 ITIH1P19827 911 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 ELAVL4P26378 380 aaKnown RBP17.08■□□□□ 0.32
COL9A3-205ENST00000466192 ALDH4A1P30038 563 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 MAP2K4P45985 399 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 MLLT1Q03111 559 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-205ENST00000466192 DCST1Q5T197 706 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 CDC73Q6P1J9 531 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 AHSA2Q719I0 299 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 NLGN4XQ8N0W4 816 aa17.08■□□□□ 0.32
COL9A3-205ENST00000466192 ANKRD9Q96BM1 317 aaPredicted RBP17.08■□□□□ 0.32
COL9A3-205ENST00000466192 TRNT1Q96Q11 434 aaKnown RBP17.08■□□□□ 0.32
COL9A3-205ENST00000466192 DSPPQ9NZW4 1301 aa17.07■□□□□ 0.32
COL9A3-205ENST00000466192 RP1P56715 2156 aa17.07■□□□□ 0.32
COL9A3-205ENST00000466192 ARRDC5A6NEK1 342 aa17.07■□□□□ 0.32
COL9A3-205ENST00000466192 RHPN2P1A8MT19 583 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms