RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 DGKQP52824 942 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 PSG6Q00889 435 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 GUCY1A3Q02108 690 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 PLCXD2Q0VAA5 305 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 NTRK2Q16620 822 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 SPANXN4Q5MJ08 99 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 SLC22A10Q63ZE4 541 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 ZNF324BQ6AW86 544 aaPredicted RBP10.73□□□□□ -0.69
CUX1-207ENST00000465461 GPALPP1Q8IXQ4 340 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 OR2M7Q8NG81 312 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 OR5AK3PQ8NH89 298 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 RFWD2Q8NHY2 731 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 ACTRT2Q8TDY3 377 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 NODALQ96S42 347 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 PRPF18Q99633 342 aaKnown RBP10.73□□□□□ -0.69
CUX1-207ENST00000465461 BARD1Q99728 777 aaKnown RBP10.73□□□□□ -0.69
CUX1-207ENST00000465461 BHLHE41Q9C0J9 482 aaPredicted RBP10.73□□□□□ -0.69
CUX1-207ENST00000465461 PROK2Q9HC23 129 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 SH2D2AQ9NP31 389 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 AGPAT4Q9NRZ5 378 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 SACM1LQ9NTJ5 587 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 ACSS1Q9NUB1 689 aaPredicted RBP10.73□□□□□ -0.69
CUX1-207ENST00000465461 VPS4AQ9UN37 437 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 NPIPA1Q9UND3 350 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 KLF13Q9Y2Y9 288 aaPredicted RBP10.73□□□□□ -0.69
CUX1-207ENST00000465461 PCDHGB6Q9Y5F9 930 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 CHCHD2Q9Y6H1 151 aaPredicted RBP10.73□□□□□ -0.69
CUX1-207ENST00000465461 CFAP46Q8IYW2 2715 aa10.73□□□□□ -0.69
CUX1-207ENST00000465461 SPENQ96T58 3664 aaKnown RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 GXYLT2A0PJZ3 443 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 ASPDHA6ND91 283 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 FRG2CA6NGY1 282 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 FAM166BA8MTA8 275 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 KLRC4-KLRK1H3BQV0 150 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 CDK2AP1O14519 115 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 UBDO15205 165 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 ATP8B1O43520 1251 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 EDF1O60869 148 aaKnown RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 UGT2B11O75310 529 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 REM1O75628 298 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 PPM1BO75688 479 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 WISP1O95388 367 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 PSMG1O95456 288 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 CBX6O95503 412 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 C1QCP02747 245 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 P04436 131 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 CD1EP15812 388 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 GABRA3P34903 492 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 RFX3P48380 749 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 TDGF1P3P51864 188 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 CASP9P55211 416 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 NRG3P56975 720 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 KCNK10P57789 538 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 C21orf58P58505 322 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 HBA1P69905 142 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 HSF1Q00613 529 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 ALDH6A1Q02252 535 aaKnown RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 GAB1Q13480 694 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 RPS6KA2Q15349 733 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 EIF2S3LQ2VIR3 472 aaKnown RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 FAM174BQ3ZCQ3 159 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 PAOXQ6QHF9 649 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 RGS9BPQ6ZS82 235 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 CAMKMTQ7Z624 323 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 GALNT10Q86SR1 603 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 LRRC34Q8IZ02 419 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 GOLM1Q8NBJ4 401 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 C17orf47Q8NEP4 570 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 OR52N2Q8NGI0 321 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 OR9I1Q8NGQ6 314 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 CEP70Q8NHQ1 597 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 SPPL2AQ8TCT8 520 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 PAQR8Q8TEZ7 354 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 OR5P2Q8WZ92 322 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 PIK3R3Q92569 461 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 NR4A3Q92570 626 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 DIO2Q92813 273 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 HGDQ93099 445 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 EFHD2Q96C19 240 aaPredicted RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 ERP27Q96DN0 273 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 FAM120BQ96EK7 910 aaKnown RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 HSPBAP1Q96EW2 488 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 GIMAP5Q96F15 307 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 SGCZQ96LD1 299 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 JSRP1Q96MG2 331 aaPredicted RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 BTBD9Q96Q07 612 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 CLMPQ9H6B4 373 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 NPHS2Q9NP85 383 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 MED4Q9NPJ6 270 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 ATAD3AQ9NVI7 634 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 TUBA8Q9NY65 449 aaPredicted RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 DCTN4Q9UJW0 460 aa10.72□□□□□ -0.69
CUX1-207ENST00000465461 CNOT11Q9UKZ1 510 aaKnown RBP10.72□□□□□ -0.69
CUX1-207ENST00000465461 TO15178 435 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 EMC8O43402 210 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 HS6ST1O60243 411 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 SCN2BO60939 215 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 PDE9AO76083 593 aa10.71□□□□□ -0.69
CUX1-207ENST00000465461 SLITRK5O94991 958 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms