RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MSLNLQ96KJ4 702 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 EGLN3Q9H6Z9 239 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CKLFQ9UBR5 152 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 PCDHGA2Q9Y5H1 932 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 ARPC4-TTLL3A0A0A6YYG9 625 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 MEN1O00255 615 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FLRT2O43155 660 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 PTTG1O95997 202 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FNTBP49356 437 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 ADAM8P78325 824 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 AQP6Q13520 282 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 PODNL1Q6PEZ8 512 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 SERPINA12Q8IW75 414 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 TMEFF1Q8IYR6 380 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 SAMD14Q8IZD0 417 aaPredicted RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 JAGN1Q8N5M9 183 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 NAXEQ8NCW5 288 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 SMPDL3BQ92485 455 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 KCNN1Q92952 543 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 ZNF486Q96H40 463 aaPredicted RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 SIAEQ9HAT2 523 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 DIABLOQ9NR28 239 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 TAS2R10Q9NYW0 307 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FBXL3Q9UKT7 428 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 SPTBN2O15020 2390 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 GRXCR2A6NFK2 248 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 RAD1O60671 282 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FMO6PO60774 539 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 TRIM3O75382 744 aaPredicted RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 FBXO45P0C2W1 286 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CLEC2LP0C7M8 214 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 NAT1P18440 290 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 NDUFV2P19404 249 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 PSMA3P25788 255 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 STOMP27105 288 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 TSPAN5P62079 268 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FGFBP1Q14512 234 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 OR4C11Q6IEV9 310 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 BTN2A1Q7KYR7 527 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 FOXRED2Q8IWF2 684 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 SLC44A3Q8N4M1 653 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 GNPDA2Q8TDQ7 276 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 TREX2Q9BQ50 279 aaPredicted RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 RAB11FIP5Q9BXF6 653 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 CACNG6Q9BXT2 260 aa8.6□□□□□ -1.03
HPS4-208ENST00000464362 EXOSC1Q9Y3B2 195 aaKnown RBP8.6□□□□□ -1.03
HPS4-208ENST00000464362 HEPACAM2A8MVW5 462 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 ARL6IP5O75915 188 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 KAT7O95251 611 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 PEX11BO96011 259 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 IL7P13232 177 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 AK4P27144 223 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 ARFIP1P53367 373 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 NTRK2Q16620 822 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TMEM44Q2T9K0 475 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 C1QTNF12Q5T7M4 302 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 PAMR1Q6UXH9 720 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 BHLHA9Q7RTU4 235 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TRIM46Q7Z4K8 759 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 CAMKVQ8NCB2 501 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SUN3Q8TAQ9 357 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 MSANTD3Q96H12 275 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 DPCDQ9BVM2 203 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 COMMD4Q9H0A8 199 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 PPIL3Q9H2H8 161 aaKnown RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 VNN3Q9NY84 501 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 NDUFAF4Q9P032 175 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 PFDN2Q9UHV9 154 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 MEIOCA2RUB1 952 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 RNASET2O00584 256 aaKnown RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 ANKRD28O15084 1053 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 EMC8O43402 210 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 GIMD1P0DJR0 217 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 ITGAMP11215 1152 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 HMGA1P17096 107 aaKnown RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 F8A1P23610 371 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 VAMP1P23763 118 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 GIPRP48546 466 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 WNT4P56705 351 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TAP2Q03519 686 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SNTB2Q13425 540 aaKnown RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 TBCEQ15813 527 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 ZNF750Q32MQ0 723 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TCEAL5Q5H9L2 206 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 PIP5KL1Q5T9C9 394 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 ELMOD2Q8IZ81 293 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SLC39A11Q8N1S5 342 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 CHCHD4Q8N4Q1 142 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SLC38A5Q8WUX1 472 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SLC22A18Q96BI1 424 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 ZMYND19Q96E35 227 aaPredicted RBP8.59□□□□□ -1.03
HPS4-208ENST00000464362 C16orf58Q96GQ5 468 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 DHRS1Q96LJ7 313 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 EPYCQ99645 322 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 TRIM2Q9C040 744 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 SPTA1P02549 2419 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 ARFGEF1Q9Y6D6 1849 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 OR6C74A6NCV1 312 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 ASPDHA6ND91 283 aa8.59□□□□□ -1.03
HPS4-208ENST00000464362 CACNG3O60359 315 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms