RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 HERV-K104P63124 156 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 XIAPP98170 497 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 CYCSP99999 105 aaKnown RBP3.41□□□□□ -1.86
ITGB1-208ENST00000464001 IL18Q14116 193 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 KRTAP13-3Q3SY46 172 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 GPAT3Q53EU6 434 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 CARD17Q5XLA6 110 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 LRRC66Q68CR7 880 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 BLOC1S2Q6QNY1 142 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 KDM7AQ6ZMT4 941 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 ANKRD33Q7Z3H0 272 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 SERINC5Q86VE9 423 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 SPATA24Q86W54 205 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 AMIGO1Q86WK6 493 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 FAM131BQ86XD5 332 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 SLC39A11Q8N1S5 342 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 ARFGAP2Q8N6H7 521 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 NECAB1Q8N987 351 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 BBS1Q8NFJ9 593 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 OR9K2Q8NGE7 335 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 PNPT1Q8TCS8 783 aaKnown RBP3.41□□□□□ -1.86
ITGB1-208ENST00000464001 UBTD2Q8WUN7 234 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 NCLNQ969V3 563 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 ISG20Q96AZ6 181 aaKnown RBP3.41□□□□□ -1.86
ITGB1-208ENST00000464001 C12orf66Q96MD2 445 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 TMEM43Q9BTV4 400 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 COG4Q9H9E3 785 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 ZFP14Q9HCL3 533 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 SPHK2Q9NRA0 654 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 OR6C2Q9NZP2 312 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 SPATA7Q9P0W8 599 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 GMEB1Q9Y692 573 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 ZNF646O15015 1829 aaPredicted RBP3.41□□□□□ -1.86
ITGB1-208ENST00000464001 ZNF318Q5VUA4 2279 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 PFASO15067 1338 aa3.41□□□□□ -1.86
ITGB1-208ENST00000464001 ARID2Q68CP9 1835 aa3.4□□□□□ -1.86
ITGB1-208ENST00000464001 LOC100506127A0A0U1RQW1 187 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF879B4DU55 563 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 SUPT3HB4E1H0 165 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PDXKO00764 312 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 DFNA5O60443 496 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 FCMRO60667 390 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 NEBLO76041 1014 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 YEATS4O95619 227 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 LGI1O95970 557 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 GOT2P00505 430 aaKnown RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 IVLP07476 585 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 IGHV4-31P0DP07 118 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 SLC2A3P11169 496 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 TPSB2P20231 275 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PRKACGP22612 351 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 DPP4P27487 766 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 RBMS1P29558 406 aaKnown RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 ATP5C1P36542 298 aaKnown RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 CEBPDP49716 269 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 TNFSF10P50591 281 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 TMEM50BP56557 158 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 RPL23AP62750 156 aaKnown RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 MYBPC1Q00872 1141 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 CALCOCO2Q13137 446 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 CUL1Q13616 776 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 NONOQ15233 471 aaKnown RBP eCLIP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 TPSAB1Q15661 275 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 NPTX1Q15818 432 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 CLPPQ16740 277 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 Q3ZCU0 254 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 AGKQ53H12 422 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 SYT14P1Q58G82 188 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 LIN9Q5TKA1 542 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PRAMEF5Q5TYX0 476 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 IL23RQ5VWK5 629 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PRAMEF6Q5VXH4 476 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 LIPKQ5VXJ0 399 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 TTC23Q5W5X9 447 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 SEL1L3Q68CR1 1132 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 ATL3Q6DD88 541 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PYHIN1Q6K0P9 492 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 ZSCAN25Q6NSZ9 544 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 LHFPL4Q7Z7J7 247 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 YRDCQ86U90 279 aaKnown RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 ECHDC2Q86YB7 292 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 TCAIMQ8N3R3 496 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 CSGALNACT2Q8N6G5 542 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 THAP8Q8NA92 274 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 SMYD1Q8NB12 490 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 SMAP2Q8WU79 429 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 SSMEM1Q8WWF3 244 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PHYHIPQ92561 330 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 EMG1Q92979 244 aaKnown RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PYCR2Q96C36 320 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 ZNF414Q96IQ9 312 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 GPR137Q96N19 417 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 PANX2Q96RD6 677 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 TESK2Q96S53 571 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 ALKBH7Q9BT30 221 aaPredicted RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 LMF2Q9BU23 707 aaKnown RBP3.4□□□□□ -1.87
ITGB1-208ENST00000464001 ZDHHC6Q9H6R6 413 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 MEAF6Q9HAF1 191 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 CYP3A43Q9HB55 503 aa3.4□□□□□ -1.87
ITGB1-208ENST00000464001 NEK6Q9HC98 313 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms