RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 DRD2P14416 443 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 TAC1P20366 129 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 CHMP24386 653 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 IL12BP29460 328 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 KRT6CP48668 564 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 MRPS22P82650 360 aaKnown RBP14.01□□□□□ -0.17
SKA3-204ENST00000462482 GAB1Q13480 694 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 EFR3AQ14156 821 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 DEFB113Q30KQ7 82 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 TEX35Q5T0J7 233 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 LGSNQ5TDP6 509 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 CHMP1BQ7LBR1 199 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 LUZP2Q86TE4 346 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 PLCZ1Q86YW0 608 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 TRIM42Q8IWZ5 723 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 C1orf52Q8N6N3 182 aaKnown RBP14.01□□□□□ -0.17
SKA3-204ENST00000462482 GBP7Q8N8V2 638 aaPredicted RBP14.01□□□□□ -0.17
SKA3-204ENST00000462482 C9orf106Q8NAJ2 232 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 WNT2BQ93097 391 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 TM4SF18Q96CE8 201 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 DACH2Q96NX9 599 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 TUBA1CQ9BQE3 449 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 LRRC1Q9BTT6 524 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 OR2B2Q9GZK3 357 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 PIGMQ9H3S5 423 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 ZDHHC18Q9NUE0 388 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 SENP1Q9P0U3 644 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 VPS29Q9UBQ0 182 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 TRPS1Q9UHF7 1281 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 ZNF639Q9UID6 485 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 DKKL1Q9UK85 242 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 UTS2RQ9UKP6 389 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 EIF3LQ9Y262 564 aaKnown RBP14.01□□□□□ -0.17
SKA3-204ENST00000462482 HCFC1P51610 2035 aa14.01□□□□□ -0.17
SKA3-204ENST00000462482 NF1P21359 2839 aa14□□□□□ -0.17
SKA3-204ENST00000462482 OR6C70A6NIJ9 312 aa14□□□□□ -0.17
SKA3-204ENST00000462482 UGT2B11O75310 529 aa14□□□□□ -0.17
SKA3-204ENST00000462482 RCBTB2O95199 551 aa14□□□□□ -0.17
SKA3-204ENST00000462482 RPS17P08708 135 aaKnown RBP14□□□□□ -0.17
SKA3-204ENST00000462482 HSD3B1P14060 373 aa14□□□□□ -0.17
SKA3-204ENST00000462482 HSD3B2P26439 372 aa14□□□□□ -0.17
SKA3-204ENST00000462482 MGAT2Q10469 447 aa14□□□□□ -0.17
SKA3-204ENST00000462482 GALNT1Q10472 559 aaPredicted RBP14□□□□□ -0.17
SKA3-204ENST00000462482 TRMT12Q53H54 448 aaKnown RBP14□□□□□ -0.17
SKA3-204ENST00000462482 ZNF572Q7Z3I7 529 aaPredicted RBP14□□□□□ -0.17
SKA3-204ENST00000462482 P4HA3Q7Z4N8 544 aa14□□□□□ -0.17
SKA3-204ENST00000462482 GRAMD2AQ8IUY3 354 aa14□□□□□ -0.17
SKA3-204ENST00000462482 ZNF483Q8TF39 744 aaPredicted RBP14□□□□□ -0.17
SKA3-204ENST00000462482 TMBIM1Q969X1 311 aa14□□□□□ -0.17
SKA3-204ENST00000462482 INTS12Q96CB8 462 aaKnown RBP14□□□□□ -0.17
SKA3-204ENST00000462482 NTNG2Q96CW9 530 aa14□□□□□ -0.17
SKA3-204ENST00000462482 ERP27Q96DN0 273 aa14□□□□□ -0.17
SKA3-204ENST00000462482 SFXN2Q96NB2 322 aa14□□□□□ -0.17
SKA3-204ENST00000462482 PAFAH2Q99487 392 aa14□□□□□ -0.17
SKA3-204ENST00000462482 FARSBQ9NSD9 589 aaKnown RBP14□□□□□ -0.17
SKA3-204ENST00000462482 JKAMPQ9P055 326 aa14□□□□□ -0.17
SKA3-204ENST00000462482 DNAJC13O75165 2243 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 GNG14A0A1W2PPG7 69 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 CCDC151A5D8V7 595 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 POC1B-GALNT4F8VUJ3 575 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 TO15178 435 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 ATE1O95260 518 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 CBX7O95931 251 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 PCSK2P16519 638 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 HMOX2P30519 316 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 SRD5A2P31213 254 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 MAGEA12P43365 314 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 CDH13P55290 713 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 ADAM8P78325 824 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 HMGCS1Q01581 520 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 RASA2Q15283 850 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 DESI1Q6ICB0 168 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 LETMD1Q6P1Q0 360 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 RELL1Q8IUW5 271 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 MMP21Q8N119 569 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 OR4K17Q8NGC6 315 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 CTHRC1Q96CG8 243 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 CNRIP1Q96F85 164 aaPredicted RBP13.99□□□□□ -0.17
SKA3-204ENST00000462482 ADOQ96SZ5 270 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 CDC42EP4Q9H3Q1 356 aaKnown RBP13.99□□□□□ -0.17
SKA3-204ENST00000462482 GALNT8Q9NY28 637 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 MCM8Q9UJA3 840 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 PACSIN3Q9UKS6 424 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 STK38LQ9Y2H1 464 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 GPR55Q9Y2T6 319 aaPredicted RBP13.99□□□□□ -0.17
SKA3-204ENST00000462482 WIF1Q9Y5W5 379 aa13.99□□□□□ -0.17
SKA3-204ENST00000462482 ANKHD1Q8IWZ3 2542 aaKnown RBP13.98□□□□□ -0.17
SKA3-204ENST00000462482 MED13LQ71F56 2210 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 SH3D21A4FU49 640 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 A8MT66 165 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 TRIM49D1C9J1S8 452 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 MANBAO00462 879 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 ULK1O75385 1050 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 SUPT7LO94864 414 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 OR4F21O95013 312 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 TSPAN8P19075 237 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 PTGDSP41222 190 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 SLCO1A2P46721 670 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 EMDP50402 254 aa13.98□□□□□ -0.17
SKA3-204ENST00000462482 MRPS35P82673 323 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms