RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 RNF103-CHMP3A0A140T963 221 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 ASPDHA6ND91 283 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 FRG2CA6NGY1 282 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 A8MVJ9 347 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 RFXANKO14593 260 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 OR6B1O95007 311 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 HMGN2P05204 90 aaKnown RBP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 GSNP06396 782 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CT45A8P0DMV1 189 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CT45A9P0DMV2 189 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 UQCRC2P22695 453 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CASRP41180 1078 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CYB561P49447 251 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 TNFSF10P50591 281 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 NRG3P56975 720 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CORO7P57737 925 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 PSG6Q00889 435 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 OC90Q02509 493 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 KLF10Q13118 480 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 LASP1Q14847 261 aaKnown RBP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 TLR1Q15399 786 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CT45A2Q5DJT8 189 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 MFSD12Q6NUT3 480 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 BHLHB9Q6PI77 547 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 SLC2A7Q6PXP3 512 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 OPN5Q6U736 354 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 LYPD8Q6UX82 237 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 DNAJC14Q6Y2X3 702 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 ZNF621Q6ZSS3 439 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 WDR53Q7Z5U6 358 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 TRIML2Q8N7C3 387 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CDRT4Q8N9R6 151 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CATSPER1Q8NEC5 780 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 FBXO30Q8TB52 745 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 ASB15Q8WXK1 588 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 GTF2H4Q92759 462 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 HSPBAP1Q96EW2 488 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 C16orf58Q96GQ5 468 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 ITCHQ96J02 903 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 BBC3Q96PG8 261 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 LMF2Q9BU23 707 aaKnown RBP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 MFRPQ9BY79 579 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 TRIM45Q9H8W5 580 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-221ENST00000462352 GPATCH2Q9NW75 528 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 HPF1Q9NWY4 346 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 LRFN1Q9P244 771 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 VPS4AQ9UN37 437 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 NPFFR2Q9Y5X5 522 aa10.89□□□□□ -0.67
CPNE1-221ENST00000462352 A0A1W2PP18 115 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 TO15178 435 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SLC22A2O15244 555 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ACOX3O15254 700 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 CCDC22O60826 627 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 NEURL1O76050 574 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 NKX2-2O95096 273 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 FAM107AO95990 144 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SNRPB2P08579 225 aaKnown RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 FBXO45P0C2W1 286 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ACP2P11117 423 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ABCD3P28288 659 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ADSLP30566 484 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 MAP3K8P41279 467 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 TRPC1P48995 793 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 PRIM2P49643 509 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 OR1C1Q15619 314 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ZNHIT3Q15649 155 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 PAGE3Q5JUK9 113 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 EXOSC6Q5RKV6 272 aaKnown RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 C6orf10Q5SRN2 563 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SPINK14Q6IE38 97 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ZCCHC12Q6PEW1 402 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 IL20RBQ6UXL0 311 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 Q6ZS92 163 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 C6orf120Q7Z4R8 191 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 MTDHQ86UE4 582 aaKnown RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ZNF227Q86WZ6 799 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SLC44A2Q8IWA5 706 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 GPALPP1Q8IXQ4 340 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 PRR22Q8IZ63 422 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 CYP4Z2PQ8N1L4 340 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SLC16A11Q8NCK7 471 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 MDS2Q8NDY4 140 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 OR4N2Q8NGD1 307 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 TSPEARQ8WU66 669 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SLC39A7Q92504 469 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SLC9A6Q92581 669 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 JADE3Q92613 823 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 HOXB13Q92826 284 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SPACA9Q96E40 222 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SIGLEC12Q96PQ1 595 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SLC35A5Q9BS91 424 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 YIPF4Q9BSR8 244 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 Q9N2J8 555 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 SLC6A13Q9NSD5 602 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 RYDENQ9NUL5 291 aaKnown RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ARMCX1Q9P291 453 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 LEF1Q9UJU2 399 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-221ENST00000462352 ARL2BPQ9Y2Y0 163 aa10.88□□□□□ -0.67
CPNE1-221ENST00000462352 NDUFAF1Q9Y375 327 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms