RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ACOX3O15254 700 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 TMCC2O75069 709 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 GBAP04062 536 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 MTHFD2P13995 350 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 POU2F1P14859 743 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 PORP16435 677 aaPredicted RBP9.81□□□□□ -0.84
CBX3-205ENST00000462165 CNTFP26441 200 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 GMPRP36959 345 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 GP5P40197 560 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 KIR2DL2P43627 348 aaPredicted RBP9.81□□□□□ -0.84
CBX3-205ENST00000462165 PLCXD2Q0VAA5 305 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 MGAT2Q10469 447 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 MAP4K2Q12851 820 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 DLG1Q12959 904 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 CAPRIN1Q14444 709 aaKnown RBP9.81□□□□□ -0.84
CBX3-205ENST00000462165 ZNF550Q7Z398 422 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 P4HA3Q7Z4N8 544 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 BTLAQ7Z6A9 289 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 ZBED8Q8IZ13 594 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 MEIOBQ8N635 442 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 CNEP1R1Q8N9A8 125 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 WDR20Q8TBZ3 569 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 DTNBP1Q96EV8 351 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 PGM2Q96G03 612 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 SFXN2Q96NB2 322 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 SLC39A3Q9BRY0 314 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 ITPAQ9BY32 194 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 OPN3Q9H1Y3 402 aaPredicted RBP9.81□□□□□ -0.84
CBX3-205ENST00000462165 NMRAL1Q9HBL8 299 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 ZNF701Q9NV72 531 aaPredicted RBP9.81□□□□□ -0.84
CBX3-205ENST00000462165 TXNDC16Q9P2K2 825 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 BCAP29Q9UHQ4 241 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 ZNF639Q9UID6 485 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 SNX12Q9UMY4 172 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 ANGPTL3Q9Y5C1 460 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 CR1P17927 2039 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 ROS1P08922 2347 aa9.81□□□□□ -0.84
CBX3-205ENST00000462165 USF3Q68DE3 2245 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 SONP18583 2426 aaKnown RBP9.8□□□□□ -0.84
CBX3-205ENST00000462165 LRRC14BA6NHZ5 514 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 OR6C70A6NIJ9 312 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 C16orf97H3BN30 126 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 FOXE1O00358 373 aaPredicted RBP9.8□□□□□ -0.84
CBX3-205ENST00000462165 TO15178 435 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 SOX30O94993 753 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 SEMA3DO95025 777 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 CGAP01215 116 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 SSTR1P30872 391 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 HMGCS1Q01581 520 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 DR1Q01658 176 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 CPSF6Q16630 551 aaKnown RBP eCLIP9.8□□□□□ -0.84
CBX3-205ENST00000462165 HEPHL1Q6MZM0 1159 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 FAM111BQ6SJ93 734 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 CYS1Q717R9 158 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 SLC35F6Q8N357 371 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 TMEM171Q8WVE6 324 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 CAVIN3Q969G5 261 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 TMCO6Q96DC7 493 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 SERPINI1Q99574 410 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 PIGQQ9BRB3 760 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 BRINP2Q9C0B6 783 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 CXorf56Q9H5V9 222 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 MAT2BQ9NZL9 334 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 EHD3Q9NZN3 535 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 HEY2Q9UBP5 337 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 FBXL2Q9UKC9 423 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 CES1P1Q9UKY3 287 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 PCNX3Q9H6A9 2034 aa9.8□□□□□ -0.84
CBX3-205ENST00000462165 FRG2CA6NGY1 282 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 SLC22A20A6NK97 555 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 FAM159BA6NKW6 160 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 SYCE1LA8MT33 242 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 RNF212BA8MTL3 300 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 EMC8O43402 210 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 ZIC3O60481 467 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 CBX7O95931 251 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 ATP1B1P05026 303 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 LTA4HP09960 611 aaKnown RBP9.79□□□□□ -0.84
CBX3-205ENST00000462165 CD8BP10966 210 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 PEPDP12955 493 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 DRD5P21918 477 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 SPRP35270 261 aaPredicted RBP9.79□□□□□ -0.84
CBX3-205ENST00000462165 PPICP45877 212 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 KCNJ5P48544 419 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 NEK2P51955 445 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 GPX6P59796 221 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 TNK1Q13470 666 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 EXOSC7Q15024 291 aaKnown RBP9.79□□□□□ -0.84
CBX3-205ENST00000462165 GRTP1Q5TC63 336 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 SLC48A1Q6P1K1 146 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 C22orf34Q6ZV56 151 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 RAPH1Q70E73 1250 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 CHMP1BQ7LBR1 199 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 CMC1Q7Z7K0 106 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 TBC1D1Q86TI0 1168 aaPredicted RBP9.79□□□□□ -0.84
CBX3-205ENST00000462165 GBP7Q8N8V2 638 aaPredicted RBP9.79□□□□□ -0.84
CBX3-205ENST00000462165 L3MBTL4Q8NA19 623 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 ADCY4Q8NFM4 1077 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 RHEBL1Q8TAI7 183 aa9.79□□□□□ -0.84
CBX3-205ENST00000462165 PYROXD1Q8WU10 500 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms