RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 LDB1Q86U70 411 aaPredicted RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 HMCESQ96FZ2 354 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 KLHL15Q96M94 604 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 APMAPQ9HDC9 416 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 ENY2Q9NPA8 101 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 ZDHHC4Q9NPG8 344 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 GALPQ9UBC7 116 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 SIX3O95343 332 aaPredicted RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 SLC16A8O95907 504 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 ALDOBP05062 364 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 CRHBPP24387 322 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 AKT2P31751 481 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 MCCD1P59942 119 aaPredicted RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 BTG1P62324 171 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 HMGCS1Q01581 520 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 ELOAQ14241 798 aaKnown RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 DUSP6Q16828 381 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 PUS10Q3MIT2 529 aaKnown RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 KCNIP4Q6PIL6 250 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 HIST2H3AQ71DI3 136 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 ZNF550Q7Z398 422 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 GRASPQ7Z6J2 395 aaPredicted RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 C1orf52Q8N6N3 182 aaKnown RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 SUMF2Q8NBJ7 301 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 OR13F1Q8NGS4 319 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 TSGA13Q96PP4 275 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 NTN4Q9HB63 628 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 SERINC1Q9NRX5 453 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 HECAQ9UBI9 543 aaPredicted RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 UNC119BA6NIH7 251 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 MSI1O43347 362 aaKnown RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 BPNT1O95861 308 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 GJA1P17302 382 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 NDUFS1P28331 727 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 TAS2R20P59543 309 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 RRAS2P62070 204 aaPredicted RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 RNF212Q495C1 297 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 KCTD20Q7Z5Y7 419 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 VTCN1Q7Z7D3 282 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 TMEM173Q86WV6 379 aaPredicted RBP9.29□□□□□ -0.92
UFD1-205ENST00000459854 TMEM145Q8NBT3 493 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 SORCS1Q8WY21 1168 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 NSMAFQ92636 917 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 PNPLA2Q96AD5 504 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 PRRT1Q99946 306 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 ATG5Q9H1Y0 275 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 CXCL16Q9H2A7 254 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 GORASP2Q9H8Y8 452 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 LUZP4Q9P127 313 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 ADAM18Q9Y3Q7 739 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 HCFC2Q9Y5Z7 792 aa9.29□□□□□ -0.92
UFD1-205ENST00000459854 OR6C6A6NF89 314 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 VILLO15195 856 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 SEC14L2O76054 403 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 AKAIN1P0CW23 69 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 IL12BP29460 328 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 DYRK1AQ13627 763 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 VEZF1Q14119 521 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 TMEM151AQ8N4L1 468 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 CCDC71LQ8N9Z2 235 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 THAP4Q8WY91 577 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 SMOQ99835 787 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 GAL3ST1Q99999 423 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 MIR1-1HGQ9H1L0 117 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 RBFOX1Q9NWB1 397 aaKnown RBP9.28□□□□□ -0.92
UFD1-205ENST00000459854 TMEM98Q9Y2Y6 226 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 C5orf67F2Z3F1 127 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 IMPA2O14732 288 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 FMO6PO60774 539 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 SPDEFO95238 335 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 GGT2P36268 569 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 SPOCK1Q08629 439 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 RAB11BQ15907 218 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 TCTN1Q2MV58 587 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 LRRC37A5PQ49AS3 106 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 C3orf33Q6P1S2 294 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 CEP68Q76N32 757 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 RD3Q7Z3Z2 195 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 TAC4Q86UU9 113 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 CLDN22Q8N7P3 220 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 DCBLD1Q8N8Z6 715 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 HLA-CQ95604 372 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 TMEM41AQ96HV5 264 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 SPACA7Q96KW9 195 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 MMP28Q9H239 520 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.28□□□□□ -0.92
UFD1-205ENST00000459854 A0A1W2PRU2 124 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 HIDE1A8MVS5 230 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 CDC7O00311 574 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 UBFD1O14562 309 aaKnown RBP9.28□□□□□ -0.92
UFD1-205ENST00000459854 CXCR1P25024 350 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 RAB40BQ12829 278 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 MLLT11Q13015 90 aaPredicted RBP9.28□□□□□ -0.92
UFD1-205ENST00000459854 PPP1R3AQ16821 1122 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 DUSP7Q16829 419 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 CDNFQ49AH0 187 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 SPIN3Q5JUX0 258 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 PGM2L1Q6PCE3 622 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 ARHGAP12Q8IWW6 846 aa9.28□□□□□ -0.92
UFD1-205ENST00000459854 OR51G2Q8NGK0 314 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms