RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ITGA2P17301 1181 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 CKMT2P17540 419 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 NT5EP21589 574 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 GALNSP34059 522 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 MC3RP41968 323 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 CLCN2P51788 898 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 ARHGDIAP52565 204 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 PRKAG1P54619 331 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 ZNHIT3Q15649 155 aaPredicted RBP8.37□□□□□ -1.07
VPS50-207ENST00000458530 GPR19Q15760 415 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 IFI44LQ53G44 452 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 CYBRD1Q53TN4 286 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 CRB2Q5IJ48 1285 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 FAM180BQ6P0A1 224 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 TNFAIP8L2Q6P589 184 aaPredicted RBP8.37□□□□□ -1.07
VPS50-207ENST00000458530 TTLL10Q6ZVT0 673 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 MED25Q71SY5 747 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 C16orf62Q7Z3J2 963 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 ARHGAP22Q7Z5H3 698 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 ZC3H7AQ8IWR0 971 aaKnown RBP8.37□□□□□ -1.07
VPS50-207ENST00000458530 ST13P4Q8IZP2 240 aaPredicted RBP8.37□□□□□ -1.07
VPS50-207ENST00000458530 CLEC4FQ8N1N0 589 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 OR2L13Q8N349 312 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 SVOPLQ8N434 492 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 HORMAD2Q8N7B1 307 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 OR5T3Q8NGG3 340 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 NRG4Q8WWG1 115 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 GEMIN6Q8WXD5 167 aaKnown RBP8.37□□□□□ -1.07
VPS50-207ENST00000458530 FKBP10Q96AY3 582 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 VPS50Q96JG6 964 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 CNDP2Q96KP4 475 aaKnown RBP8.37□□□□□ -1.07
VPS50-207ENST00000458530 DGAT2Q96PD7 388 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 BTBD9Q96Q07 612 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 BTBD2Q9BX70 525 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 OSBPL10Q9BXB5 764 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 OR51I1Q9H343 314 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 ZFAND3Q9H8U3 227 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 DNAJB9Q9UBS3 223 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 RARRES3Q9UL19 164 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 ERVK-11Q9UQG0 969 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 V9GYQ6 96 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 NINQ8N4C6 2090 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 TEX15Q9BXT5 2789 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 LRRK2Q5S007 2527 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 FLNCQ14315 2725 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 IGHV5-10-1A0A0J9YXX1 117 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 WASHC1A8K0Z3 465 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 D6RAR5 112 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 TMX2-CTNND1H3BSU7 103 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 HMGN4O00479 90 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 HCRTR1O43613 425 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 LDB3O75112 727 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 CST1P01037 141 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 HMGN2P05204 90 aaKnown RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 MYF5P13349 255 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ATP6V1C1P21283 382 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ACP1P24666 158 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 CSTF2P33240 577 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS50-207ENST00000458530 XCR1P46094 333 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 PCBP3P57721 371 aaKnown RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 SELENOWP63302 87 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 IGLV3-21P80748 117 aaPredicted RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 EEF1A2Q05639 463 aaKnown RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 GK3PQ14409 553 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 KCNAB1Q14722 419 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 LASP1Q14847 261 aaKnown RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 MYBPC3Q14896 1274 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ZNF628Q5EBL2 1059 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 PHF19Q5T6S3 580 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ARHGAP40Q5TG30 622 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 LPCAT4Q643R3 524 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 CDC73Q6P1J9 531 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ENPP6Q6UWR7 440 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 LRRC69Q6ZNQ3 347 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ZBTB49Q6ZSB9 765 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ARMC8Q8IUR7 673 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ZDHHC21Q8IVQ6 265 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 GALNT12Q8IXK2 581 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 LILRA2Q8N149 483 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 C10orf111Q8N326 155 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 VWA5B2Q8N398 1253 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 CDRT4Q8N9R6 151 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 OR51Q1Q8NH59 317 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 OR1L3Q8NH93 324 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ADAMTS15Q8TE58 950 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 MAL2Q969L2 176 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ZNF501Q96CX3 271 aaPredicted RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 RBM18Q96H35 190 aaKnown RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 PEX11GQ96HA9 241 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 TMEM19Q96HH6 336 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 TPD52L3Q96J77 140 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 MAGED4Q96JG8 741 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 HSH2DQ96JZ2 352 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 ART5Q96L15 291 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 CCDC74BQ96LY2 380 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 DOHHQ9BU89 302 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 SPRTNQ9H040 489 aaPredicted RBP8.36□□□□□ -1.07
VPS50-207ENST00000458530 ZNF304Q9HCX3 659 aa8.36□□□□□ -1.07
VPS50-207ENST00000458530 MKKSQ9NPJ1 570 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms