RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NODALQ96S42 347 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 TUBA1CQ9BQE3 449 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 ITPAQ9BY32 194 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 PYCARDQ9ULZ3 195 aa19.59■□□□□ 0.73
CPNE1-220ENST00000458038 NSD1Q96L73 2696 aaPredicted RBP19.59■□□□□ 0.73
CPNE1-220ENST00000458038 VPS13CQ709C8 3753 aa19.58■□□□□ 0.73
CPNE1-220ENST00000458038 PRAMEF25A6NGN4 478 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 FRG2CA6NGY1 282 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 OR6C70A6NIJ9 312 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 H0Y3Z8 333 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 PTGDSP41222 190 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 SERPINB9P50453 376 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 DIO3P55073 304 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 EXOSC7Q15024 291 aaKnown RBP19.58■□□□□ 0.72
CPNE1-220ENST00000458038 AAGABQ6PD74 315 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 TAOK1Q7L7X3 1001 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 IFNEQ86WN2 208 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 TRIM42Q8IWZ5 723 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 SAMD14Q8IZD0 417 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-220ENST00000458038 OR4F6Q8NGB9 312 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 SMPDL3BQ92485 455 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 KLHL29Q96CT2 875 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 MRPL57Q9BQC6 102 aaKnown RBP19.58■□□□□ 0.72
CPNE1-220ENST00000458038 TSPYL1Q9H0U9 437 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 GALNT9Q9HCQ5 603 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 SERHLQ9NQF3 203 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 BEX4Q9NWD9 120 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-220ENST00000458038 NDRG3Q9UGV2 375 aa19.58■□□□□ 0.72
CPNE1-220ENST00000458038 CASKO14936 926 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 UGT2B11O75310 529 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 CBX7O95931 251 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 INHBAP08476 426 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 SRD5A2P31213 254 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 MAGEA12P43365 314 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 CPA2P48052 419 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 PCYT1AP49585 367 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 EMDP50402 254 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 GALNT1Q10472 559 aaPredicted RBP19.57■□□□□ 0.72
CPNE1-220ENST00000458038 NNATQ16517 81 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 SGO1Q5FBB7 561 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 PLCZ1Q86YW0 608 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 RELL1Q8IUW5 271 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 WDSUB1Q8N9V3 476 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 ZNF675Q8TD23 568 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 SLC44A1Q8WWI5 657 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 SELENOMQ8WWX9 145 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 NSUN5Q96P11 429 aaKnown RBP19.57■□□□□ 0.72
CPNE1-220ENST00000458038 COL21A1Q96P44 957 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 FUT8Q9BYC5 575 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 ZDHHC18Q9NUE0 388 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 TAS2R10Q9NYW0 307 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 XPR1Q9UBH6 696 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 MAPRE3Q9UPY8 281 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 GPR55Q9Y2T6 319 aaPredicted RBP19.57■□□□□ 0.72
CPNE1-220ENST00000458038 PLLPQ9Y342 182 aa19.57■□□□□ 0.72
CPNE1-220ENST00000458038 SH3D21A4FU49 640 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 PDYNP01213 254 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 HRGP04196 525 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 CRHP06850 196 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 HSD3B1P14060 373 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 DRD2P14416 443 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 HSD3B2P26439 372 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 CNTFP26441 200 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 HOXC12P31275 282 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 SLCO1A2P46721 670 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 GFRA1P56159 465 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 ADCY4Q8NFM4 1077 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 OR52R1Q8NGF1 315 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 ZNF681Q96N22 645 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 C1QTNF3Q9BXJ4 246 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 GALNT8Q9NY28 637 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 VPS29Q9UBQ0 182 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 DLGAP4Q9Y2H0 992 aa19.56■□□□□ 0.72
CPNE1-220ENST00000458038 REM1O75628 298 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 RPS17P08708 135 aaKnown RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 ETF1P62495 437 aaKnown RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 HMGCS1Q01581 520 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 SRYQ05066 204 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 FOXF2Q12947 444 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 EFR3AQ14156 821 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 BCL2A1Q16548 175 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 TRMT12Q53H54 448 aaKnown RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 SHEQ5VZ18 495 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 ZNF483Q8TF39 744 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 INTS12Q96CB8 462 aaKnown RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 CNRIP1Q96F85 164 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 SLC35A4Q96G79 324 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 BTBD9Q96Q07 612 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 MRPL46Q9H2W6 279 aaKnown RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 GSX1Q9H4S2 264 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 FARSBQ9NSD9 589 aaKnown RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 NINJ2Q9NZG7 142 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 CLCF1Q9UBD9 225 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 PACSIN3Q9UKS6 424 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 NFU1Q9UMS0 254 aa19.55■□□□□ 0.72
CPNE1-220ENST00000458038 EIF3LQ9Y262 564 aaKnown RBP19.55■□□□□ 0.72
CPNE1-220ENST00000458038 C2orf72A6NCS6 295 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 A8MXE2 369 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 CD53P19397 219 aa19.54■□□□□ 0.72
CPNE1-220ENST00000458038 SOX18P35713 384 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms