RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RPS26P11Q5JNZ5 115 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 FIP1L1Q6UN15 594 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 AFAP1L2Q8N4X5 818 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 AQP11Q8NBQ7 271 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PROKR2Q8NFJ6 384 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 KBTBD8Q8NFY9 601 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 RNF166Q96A37 237 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 AP2M1Q96CW1 435 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF75AQ96N20 296 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 DERL3Q96Q80 235 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PANX1Q96RD7 426 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 UQCC2Q9BRT2 126 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 NAA11Q9BSU3 229 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 DPY30Q9C005 99 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 FANCFQ9NPI8 374 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 OLA1Q9NTK5 396 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 IL17CQ9P0M4 197 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 HCN3Q9P1Z3 774 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PURGQ9UJV8 347 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 DNAJC25-GNG10A0A024R161 153 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CD8B2A6NJW9 211 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 OR6C75A6NL08 312 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 NRG2O14511 850 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SEPT4O43236 478 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ULK1O75385 1050 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CH25HO95992 272 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 NPPAP01160 153 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 IGHV2-70P01814 119 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 KRT6BP04259 564 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CD8BP10966 210 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 LHCGRP22888 699 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PSMA1P25786 263 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PREPP48147 710 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SELENOWP63302 87 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 TNFRSF17Q02223 184 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MAP4K2Q12851 820 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CNTN1Q12860 1018 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PLD1Q13393 1074 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MRPL58Q14197 206 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 GINS1Q14691 196 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 C9orf152Q5JTZ5 239 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 NOXRED1Q6NXP6 359 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 XKRXQ6PP77 449 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MIB1Q86YT6 1006 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 GPALPP1Q8IXQ4 340 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MICALL2Q8IY33 904 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 UMODL1-AS1Q8N2C9 162 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 BVESQ8NE79 360 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 NANPQ8TBE9 248 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SP7Q8TDD2 431 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 LRR1Q96L50 414 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 GFI1Q99684 422 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 FAM117AQ9C073 453 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 KCNH6Q9H252 994 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MUC13Q9H3R2 512 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 IL26Q9NPH9 171 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 RBPJLQ9UBG7 517 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PRKAG2Q9UGJ0 569 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 NTNG1Q9Y2I2 539 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 GJA3Q9Y6H8 435 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 COL4A3Q01955 1670 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 STX16O14662 325 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SGTAO43765 313 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 RHOBTB1O94844 696 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 GABRA1P14867 456 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ATF1P18846 271 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ITGB8P26012 769 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 NOS3P29474 1203 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 XCR1P46094 333 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PLAURQ03405 335 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 FAM26DQ5JW98 314 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MARC1Q5VT66 337 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 TAPT1Q6NXT6 567 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 RTL4Q6ZR62 310 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 NDUFAF7Q7L592 441 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 OAFQ86UD1 273 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 AMER3Q8N944 861 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ANKRD53Q8N9V6 530 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 OR5M9Q8NGP3 310 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNRF4Q8WWF5 429 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 RAB8BQ92930 207 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ELMOD3Q96FG2 381 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF416Q9BWM5 594 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 EGLN3Q9H6Z9 239 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 REEP1Q9H902 201 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 LRTM1Q9HBL6 345 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 THSD1Q9NS62 852 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 FKBP7Q9Y680 259 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SOX1O00570 391 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CKMP06732 381 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CCR7P32248 378 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MPIP34949 423 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 DCDP81605 110 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 INSM1Q01101 510 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 GTF2H2Q13888 395 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PCBP2Q15366 365 aaKnown RBP eCLIP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CRTC2Q53ET0 693 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MS4A13Q5J8X5 152 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MRNIPQ6NTE8 343 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 GTF2H2CQ6P1K8 395 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms