RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OR52P1PQ8NH57 321 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 PSMA8Q8TAA3 256 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 SLC7A13Q8TCU3 470 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 PIK3R3Q92569 461 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 ARSGQ96EG1 525 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 SLC35A4Q96G79 324 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 ZNF764Q96H86 408 aaPredicted RBP12.81□□□□□ -0.36
CLK3-203ENST00000454830 SHDQ96IW2 340 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 MS4A4EQ96PG1 132 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 ENOPH1Q9UHY7 261 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 SLC22A7Q9Y694 548 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 WDR87Q6ZQQ6 2873 aa12.81□□□□□ -0.36
CLK3-203ENST00000454830 CLDN24A6NM45 220 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 METTL12A8MUP2 240 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 TNFSF14O43557 240 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 C21orf33P30042 268 aaPredicted RBP12.8□□□□□ -0.36
CLK3-203ENST00000454830 CRISP1P54107 249 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 SYT16Q17RD7 645 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 XAF1Q6GPH4 301 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 COMTD1Q86VU5 262 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 C19orf47Q8N9M1 422 aaKnown RBP12.8□□□□□ -0.36
CLK3-203ENST00000454830 ZFPM2Q8WW38 1151 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 GPR83Q9NYM4 423 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 CALML5Q9NZT1 146 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 KCMF1Q9P0J7 381 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 PILRAQ9UKJ1 303 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 COLQQ9Y215 455 aaPredicted RBP12.8□□□□□ -0.36
CLK3-203ENST00000454830 HSPE1-MOB4S4R3N1 261 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 BCL10O95999 233 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 IFNA16P05015 189 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 CHMP24386 653 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 MLLT3P42568 568 aaPredicted RBP12.8□□□□□ -0.36
CLK3-203ENST00000454830 ST13P50502 369 aaKnown RBP12.8□□□□□ -0.36
CLK3-203ENST00000454830 COL19A1Q14993 1142 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 MFSD12Q6NUT3 480 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 PODNL1Q6PEZ8 512 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 ZNF730Q6ZMV8 503 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 IQCF1Q8N6M8 205 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 TMEM52Q8NDY8 209 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 OR4K5Q8NGD3 323 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 OR13F1Q8NGS4 319 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 ADAMTS16Q8TE57 1224 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 FUNDC2Q9BWH2 189 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 ZDBF2Q9HCK1 2354 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 ALAS2P22557 587 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 FUT5Q11128 374 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 BNIP3Q12983 259 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 USP53Q70EK8 1073 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 PEX5LQ8IYB4 626 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 OTULINQ96BN8 352 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 TM4SF19Q96DZ7 209 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 SPACA7Q96KW9 195 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 CNPPD1Q9BV87 410 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 SEMA6CQ9H3T2 930 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 CCNB1IP1Q9NPC3 277 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 SLC6A14Q9UN76 642 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 LIPT1Q9Y234 373 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 NTNG1Q9Y2I2 539 aa12.8□□□□□ -0.36
CLK3-203ENST00000454830 A8MU76 341 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 A8MVJ9 347 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 CHST10O43529 356 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 WBP4O75554 376 aaKnown RBP12.79□□□□□ -0.36
CLK3-203ENST00000454830 CYP7B1O75881 506 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 RECKO95980 971 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 LCKP06239 509 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 PGDP52209 483 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 GFERP55789 205 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLK3-203ENST00000454830 NNATQ16517 81 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 DUSP5Q16690 384 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 Q8N9G6 341 aaPredicted RBP12.79□□□□□ -0.36
CLK3-203ENST00000454830 KLHL6Q8WZ60 621 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 MMABQ96EY8 250 aaPredicted RBP12.79□□□□□ -0.36
CLK3-203ENST00000454830 RBM18Q96H35 190 aaKnown RBP12.79□□□□□ -0.36
CLK3-203ENST00000454830 C10orf90Q96M02 699 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 GABARAPL3Q9BY60 117 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 TVP23BQ9NYZ1 205 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 TRIM64A6NGJ6 449 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 FAAHO00519 579 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 GALR3O60755 368 aaPredicted RBP12.79□□□□□ -0.36
CLK3-203ENST00000454830 GPR75O95800 540 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 ALOX5P09917 674 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 CDC73Q6P1J9 531 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 SLC38A4Q969I6 547 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 RSPO3Q9BXY4 272 aaPredicted RBP12.79□□□□□ -0.36
CLK3-203ENST00000454830 SLC38A1Q9H2H9 487 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 SYNDIG1Q9H7V2 258 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 CLN6Q9NWW5 311 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 DNAJC27Q9NZQ0 273 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 POMT2Q9UKY4 750 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 PCDHGA10Q9Y5H3 936 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 FAM221BA6H8Z2 402 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 SOX1O00570 391 aaPredicted RBP12.79□□□□□ -0.36
CLK3-203ENST00000454830 AQP9O43315 295 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 DPM1O60762 260 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 SEMA7AO75326 666 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 CPNE6O95741 557 aa12.79□□□□□ -0.36
CLK3-203ENST00000454830 STSP08842 583 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms