RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SLC35C2Q9NQQ7 365 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 PTGFRNQ9P2B2 879 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 FTSJ1Q9UET6 329 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 OAZ3Q9UMX2 235 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 LSM2Q9Y333 95 aaKnown RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 MAP4K5Q9Y4K4 846 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 PCDHGB3Q9Y5G1 929 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 MAGED1Q9Y5V3 778 aaPredicted RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 HS3ST3B1Q9Y662 390 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 PCNX2A6NKB5 2137 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 LOC101059948A0A1B0GTJ6 334 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 SGK494L7N484 410 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 SAP18O00422 153 aaKnown RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 OR1F1O43749 312 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 CIB2O75838 187 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 DRD5P21918 477 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 ACAA2P42765 397 aaKnown RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 ASMTP46597 345 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 HLCSP50747 726 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 GTF2A1P52655 376 aaPredicted RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 VLDLRP98155 873 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 LTB4RQ15722 352 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 NRF1Q16656 503 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 NADK2Q4G0N4 442 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 MFSD12Q6NUT3 480 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 NIPAL1Q6NVV3 410 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 TMEM154Q6P9G4 183 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 ZCCHC12Q6PEW1 402 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 EIF3MQ7L2H7 374 aaKnown RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 SATL1Q86VE3 508 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 KRT78Q8N1N4 520 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 HORMAD2Q8N7B1 307 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 FNDC5Q8NAU1 212 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 MORN4Q8NDC4 146 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 RCBTB1Q8NDN9 531 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 LIPHQ8WWY8 451 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 OR5P2Q8WZ92 322 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 MTFMTQ96DP5 389 aaKnown RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 ZNF578Q96N58 590 aaPredicted RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 TUBA1CQ9BQE3 449 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 PLCXD1Q9NUJ7 323 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 GID8Q9NWU2 228 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 FLRT3Q9NZU0 649 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 CTSFQ9UBX1 484 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 CDV3Q9UKY7 258 aaKnown RBP4.59□□□□□ -1.67
RIF1-207ENST00000454583 PMF1-BGLAPU3KQ54 211 aa4.59□□□□□ -1.67
RIF1-207ENST00000454583 SMIM31A0A1B0GVY4 71 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 CLOCKO15516 846 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 DNAJB5O75953 348 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 KCNH1O95259 989 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 FHP07954 510 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 TYRP1P17643 537 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 CBLP22681 906 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 MAP4P27816 1152 aaKnown RBP4.59□□□□□ -1.68
RIF1-207ENST00000454583 MLLT10P55197 1068 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 B3GALT5-AS1P59052 145 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 BIKQ13323 160 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 SLC9A5Q14940 896 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 TRIP6Q15654 476 aaKnown RBP4.59□□□□□ -1.68
RIF1-207ENST00000454583 FLYWCH1Q4VC44 716 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 TRMT12Q53H54 448 aaKnown RBP4.59□□□□□ -1.68
RIF1-207ENST00000454583 TMEM201Q5SNT2 666 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 NUP54Q7Z3B4 507 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 LACC1Q8IV20 430 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 SYTL1Q8IYJ3 562 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 CAMKVQ8NCB2 501 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 PMM1Q92871 262 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 MUL1Q969V5 352 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 RNF166Q96A37 237 aaPredicted RBP4.59□□□□□ -1.68
RIF1-207ENST00000454583 TAMM41Q96BW9 452 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 SCMH1Q96GD3 660 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 TGM7Q96PF1 710 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 CDC6Q99741 560 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 ZPBPQ9BS86 351 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 SLC25A19Q9HC21 320 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 FBXO34Q9NWN3 711 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 FAM118AQ9NWS6 357 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 NDUFAF4Q9P032 175 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 MOSPD1Q9UJG1 213 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 DYRK1BQ9Y463 629 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 HSPE1-MOB4S4R3N1 261 aa4.59□□□□□ -1.68
RIF1-207ENST00000454583 TENM4Q6N022 2769 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 SAGE2PA6NJ88 616 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 BRINP1O60477 761 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 MRPS14O60783 128 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 NPIPB7O75200 414 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 SNAP29O95721 258 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 GPR75O95800 540 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 GBAP04062 536 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 RPSAP08865 295 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 UQCRC2P22695 453 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 PPP2R1BP30154 601 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 PLA2G5P39877 138 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CAPGP40121 348 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 NME5P56597 212 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CXCR4P61073 352 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 SLC35A2P78381 396 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 EBPQ15125 230 aaKnown RBP4.58□□□□□ -1.68
RIF1-207ENST00000454583 GUSBP1Q15486 140 aa4.58□□□□□ -1.68
RIF1-207ENST00000454583 CTF1Q16619 201 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms