RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 GK5Q6ZS86 529 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 WDR75Q8IWA0 830 aaKnown RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 CHERPQ8IWX8 916 aaKnown RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 SLC34A3Q8N130 599 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 KRTCAP2Q8N6L1 136 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 NATD1Q8N6N6 113 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 OR7A2PQ8NGA2 310 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 PIWIL2Q8TC59 973 aaKnown RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 SPPL2AQ8TCT8 520 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 HGDQ93099 445 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 OMA1Q96E52 524 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 GIMAP5Q96F15 307 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 SLC35A4Q96G79 324 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 FAM173AQ9BQD7 235 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 LMF2Q9BU23 707 aaKnown RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 BHLHE41Q9C0J9 482 aaPredicted RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 ZDHHC11Q9H8X9 412 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 DDX18Q9NVP1 670 aaKnown RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 CNIH4Q9P003 139 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 SH3BP4Q9P0V3 963 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 MARCOQ9UEW3 520 aaPredicted RBP13.03□□□□□ -0.32
HDAC4-205ENST00000454542 MAPRE3Q9UPY8 281 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 ESPL1Q14674 2120 aa13.03□□□□□ -0.32
HDAC4-205ENST00000454542 LRRC3CA6NJW4 275 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 TRPC5OSA6NMA1 111 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 TSPAN2O60636 221 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 NME6O75414 186 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-205ENST00000454542 P04436 131 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 ABCB1P08183 1280 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-205ENST00000454542 LAMP1P11279 417 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 CORO7P57737 925 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 FBXW4P57775 412 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 SRSF11Q05519 484 aaKnown RBP13.02□□□□□ -0.33
HDAC4-205ENST00000454542 PLCXD2Q0VAA5 305 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 ZNF155Q12901 538 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-205ENST00000454542 TBCELQ5QJ74 424 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 SLC22A10Q63ZE4 541 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 RGS9BPQ6ZS82 235 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 PRR22Q8IZ63 422 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 TESCQ96BS2 214 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 TTTY12Q9BZ98 90 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 NEUROD4Q9HD90 331 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 ATAD3AQ9NVI7 634 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 AIG1Q9NVV5 245 aa13.02□□□□□ -0.33
HDAC4-205ENST00000454542 TUBA8Q9NY65 449 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-205ENST00000454542 USP9XQ93008 2570 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-205ENST00000454542 UQCRHLA0A096LP55 91 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 OR6C70A6NIJ9 312 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 TTC36A6NLP5 189 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 TP53I11O14683 189 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 SCN2BO60939 215 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 TRIM3O75382 744 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-205ENST00000454542 STSP08842 583 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 EPHA3P29320 983 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 PIGAP37287 484 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 RFC3P40938 356 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 DNASE1L1P49184 302 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 WNT3P56703 355 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 KCNK10P57789 538 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 KRTCAP3Q53RY4 240 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 CMPK2Q5EBM0 449 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 CPTPQ5TA50 214 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 PRAMEF20Q5VT98 475 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 FAM47EQ6ZV65 393 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 FAM13CQ8NE31 585 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 OR8J2Q8NGG1 315 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 ACTRT2Q8TDY3 377 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 NUDT8Q8WV74 236 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 CKAP2Q8WWK9 683 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 OR5P2Q8WZ92 322 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 MS4A4EQ96PG1 132 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 ANGPTL4Q9BY76 406 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 ACBD3Q9H3P7 528 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-205ENST00000454542 ZNF703Q9H7S9 590 aaPredicted RBP13.01□□□□□ -0.33
HDAC4-205ENST00000454542 IL1RL2Q9HB29 575 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 SLCO1B3Q9NPD5 702 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 INTS9Q9NV88 658 aaKnown RBP13.01□□□□□ -0.33
HDAC4-205ENST00000454542 SEC14L3Q9UDX4 400 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 ZNF835Q9Y2P0 537 aa13.01□□□□□ -0.33
HDAC4-205ENST00000454542 SVILO95425 2214 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 ZGRF1Q86YA3 2104 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 G3V3Y1 287 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 ADAM10O14672 748 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 TFECO14948 347 aaPredicted RBP13□□□□□ -0.33
HDAC4-205ENST00000454542 ABCB7O75027 752 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 UGT2B11O75310 529 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 NKX2-2O95096 273 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 UNC5CO95185 931 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 KITP10721 976 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 PTGDSP41222 190 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 MANFP55145 182 aaKnown RBP13□□□□□ -0.33
HDAC4-205ENST00000454542 RPP38P78345 283 aaKnown RBP13□□□□□ -0.33
HDAC4-205ENST00000454542 DPY19L1Q2PZI1 675 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 EIF2S3LQ2VIR3 472 aaKnown RBP13□□□□□ -0.33
HDAC4-205ENST00000454542 SLC9B1Q4ZJI4 515 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 GFRALQ6UXV0 394 aa13□□□□□ -0.33
HDAC4-205ENST00000454542 Q6ZPB1 254 aaPredicted RBP13□□□□□ -0.33
HDAC4-205ENST00000454542 NUP54Q7Z3B4 507 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms