RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 XKP51811 444 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GFRA1P56159 465 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NRG3P56975 720 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PPP2R2BQ00005 443 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MGAT2Q10469 447 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FUT7Q11130 342 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TRAF3Q13114 568 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GTF2H2Q13888 395 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 UAP1Q16222 522 aaPredicted RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TRMT12Q53H54 448 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NHSL2Q5HYW2 709 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TBCELQ5QJ74 424 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 C6orf163Q5TEZ5 329 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RAET1LQ5VY80 246 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SHEQ5VZ18 495 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GTF2H2CQ6P1K8 395 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF474Q6S9Z5 364 aaPredicted RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 COMMD6Q7Z4G1 85 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 P4HA3Q7Z4N8 544 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ADGRE4PQ86SQ3 457 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GALNT10Q86SR1 603 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CREG2Q8IUH2 290 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DND1Q8IYX4 353 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CEP112Q8N8E3 955 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PTGR2Q8N8N7 351 aaPredicted RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR4N2Q8NGD1 307 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR9A2Q8NGT5 310 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FNDC9Q8TBE3 224 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 WDR20Q8TBZ3 569 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PYROXD1Q8WU10 500 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KAT2AQ92830 837 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 UBE2E3Q969T4 207 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MARK4Q96L34 752 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ADOQ96SZ5 270 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PELOQ9BRX2 385 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CAPS2Q9BXY5 557 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RTN4RQ9BZR6 473 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 NOL11Q9H8H0 719 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 DDX31Q9H8H2 851 aaKnown RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 WDR41Q9HAD4 459 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PFDN4Q9NQP4 134 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MS4A12Q9NXJ0 267 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GRHL1Q9NZI5 618 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FOXD3Q9UJU5 478 aaPredicted RBP5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 EDARQ9UNE0 448 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PCDHGB3Q9Y5G1 929 aa5.42□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ESYT3A0FGR9 886 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HMX2A2RU54 273 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CAPN14A8MX76 684 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 A8MXE2 369 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 H3BML4 177 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PPP6CO00743 305 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CASKO14936 926 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ARHGEF9O43307 516 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RAD51CO43502 376 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 AQP8O94778 261 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RCBTB2O95199 551 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CNOT4O95628 575 aaKnown RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 IL18BPO95998 194 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ACTL6AO96019 429 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OPN1LWP04000 364 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CHN1P15882 459 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF708P17019 499 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GRK2P25098 689 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SERPINB1P30740 379 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 UGT2B10P36537 528 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SLC6A8P48029 635 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RFX3P48380 749 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 KCNJ5P48544 419 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 RNF144AP50876 292 aaPredicted RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SUCLG1P53597 346 aaKnown RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MAPK12P53778 367 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CLDN15P56746 228 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CLDN20P56880 219 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 B3GALT5-AS1P59052 145 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PHEXP78562 749 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SRSF2Q01130 221 aaKnown RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 HMGCS1Q01581 520 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PCDH1Q08174 1060 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF844Q08AG5 666 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 GALNT1Q10472 559 aaPredicted RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TBL3Q12788 808 aaKnown RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF155Q12901 538 aaPredicted RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CAPRIN1Q14444 709 aaKnown RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 TSC22D1Q15714 1073 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PRICKLE4Q2TBC4 344 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CDKL4Q5MAI5 379 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 SH2D4BQ5SQS7 431 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CCNYL2Q5T2Q4 361 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 MROH9Q5TGP6 573 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 LETMD1Q6P1Q0 360 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 PLD6Q8N2A8 252 aaKnown RBP5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZNF619Q8N2I2 560 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 OR4K14Q8NGD5 310 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 CDC26Q8NHZ8 85 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FBXO30Q8TB52 745 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 STAG3L4Q8TBR4 150 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 ZPLD1Q8TCW7 415 aa5.41□□□□□ -1.54
HLA-DPA3-207ENST00000454398 FBF1Q8TES7 1133 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms