RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 P2RY8Q86VZ1 359 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 PARGQ86W56 976 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 CLIP4Q8N3C7 705 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 AVL9Q8NBF6 648 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 B3GNT7Q8NFL0 401 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 OR4K5Q8NGD3 323 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 NDNFQ8TB73 568 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 IPCEF1Q8WWN9 437 aaPredicted RBP11.04□□□□□ -0.64
VTA1-203ENST00000452973 CNDP2Q96KP4 475 aaKnown RBP11.04□□□□□ -0.64
VTA1-203ENST00000452973 LRRC61Q9BV99 259 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 FOXQ1Q9C009 403 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 UBE2ZQ9H832 354 aaPredicted RBP11.04□□□□□ -0.64
VTA1-203ENST00000452973 DNAJC27Q9NZQ0 273 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 KIR2DS5A0A0G2JLQ3 304 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 A0A0G2JNG1 304 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 KIR2DS3K7RE56 304 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 SDC3O75056 442 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 RDH16O75452 317 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 CD36P16671 472 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 ZNF10P21506 573 aaPredicted RBP11.04□□□□□ -0.64
VTA1-203ENST00000452973 KIR2DS5Q14953 304 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 EXOSC7Q15024 291 aaKnown RBP11.04□□□□□ -0.64
VTA1-203ENST00000452973 CTF1Q16619 201 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 OR9A4Q8NGU2 314 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 TBC1D15Q8TC07 691 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 MYDGFQ969H8 173 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 GIMAP5Q96F15 307 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 KLHL3Q9UH77 587 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 PCDHGB1Q9Y5G3 927 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 SLC22A7Q9Y694 548 aa11.04□□□□□ -0.64
VTA1-203ENST00000452973 NPIPA5A0A0B4J1W7 369 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 SH3PXD2BA1X283 911 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 OR2W5A6NFC9 320 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 NPIPA7E9PJI5 369 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 M0R3G1 203 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 FAAHO00519 579 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 ZIC2O95409 532 aaPredicted RBP11.03□□□□□ -0.64
VTA1-203ENST00000452973 NPIPA8P0DM63 369 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 OSMP13725 252 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 CPMP14384 443 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 PORP16435 677 aaPredicted RBP11.03□□□□□ -0.64
VTA1-203ENST00000452973 CCR5P51681 352 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 FAM214AQ32MH5 1076 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 MFSD12Q6NUT3 480 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 FAM92BQ6ZTR7 304 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 SYT13Q7L8C5 426 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 LMX1AQ8TE12 382 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 PIK3R3Q92569 461 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 MOAP1Q96BY2 351 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 PHOX2BQ99453 314 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 GIN1Q9NXP7 522 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 REV1Q9UBZ9 1251 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 FTSJ1Q9UET6 329 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 WDR87Q6ZQQ6 2873 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 SLC9B1P1A6NJY1 282 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 J3QRK9 145 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 TLR4O00206 839 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 ADAP00813 363 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 SMIM10L1P0DMW3 83 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 GLULP15104 373 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 MMP11P24347 488 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 ARFIP1P53367 373 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 MLLT10P55197 1068 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 ALDH6A1Q02252 535 aaKnown RBP11.03□□□□□ -0.64
VTA1-203ENST00000452973 DUSP5Q16690 384 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 ANKDD1AQ495B1 522 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 ZC3H14Q6PJT7 736 aaKnown RBP11.03□□□□□ -0.64
VTA1-203ENST00000452973 CASP12Q6UXS9 341 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 ANKRD13BQ86YJ7 626 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 METTL27Q8N6F8 245 aaPredicted RBP11.03□□□□□ -0.64
VTA1-203ENST00000452973 TCEANCQ8N8B7 351 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 OR52P1PQ8NH57 321 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 SMIM10Q96HG1 83 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 GPN2Q9H9Y4 310 aaPredicted RBP11.03□□□□□ -0.64
VTA1-203ENST00000452973 BCL2L10Q9HD36 194 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 TVP23BQ9NYZ1 205 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 CNIH4Q9P003 139 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 MGAT4BQ9UQ53 548 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 ENTPD2Q9Y5L3 495 aa11.03□□□□□ -0.64
VTA1-203ENST00000452973 SYNDIG1LA6NDD5 238 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 OR5K3A6NET4 321 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 ZAR1LA6NP61 321 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 A8MVJ9 347 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 CCNYL3P0C7X3 344 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 MAN2A2P49641 1150 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 RGS8P57771 180 aaPredicted RBP11.02□□□□□ -0.64
VTA1-203ENST00000452973 SMIM11AP58511 58 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 MAP4K2Q12851 820 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 ERV3-1Q14264 604 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 SYT6Q5T7P8 510 aaPredicted RBP11.02□□□□□ -0.64
VTA1-203ENST00000452973 RRM2BQ7LG56 351 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 ZER1Q7Z7L7 766 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 ZNF655Q8N720 491 aaPredicted RBP11.02□□□□□ -0.64
VTA1-203ENST00000452973 HSPBAP1Q96EW2 488 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 MS4A4EQ96PG1 132 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 GPA33Q99795 319 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 CLN6Q9NWW5 311 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 ENOPH1Q9UHY7 261 aa11.02□□□□□ -0.64
VTA1-203ENST00000452973 WDR45Q9Y484 360 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms