RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TIGD3Q6B0B8 471 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 SEM1Q6ZVN7 128 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 NUP54Q7Z3B4 507 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 TRIM46Q7Z4K8 759 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 LIX1LQ8IVB5 337 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 DMRTC2Q8IXT2 367 aaPredicted RBP11.4□□□□□ -0.58
CPSF4-208ENST00000452047 SAMD14Q8IZD0 417 aaPredicted RBP11.4□□□□□ -0.58
CPSF4-208ENST00000452047 OR10Q1Q8NGQ4 319 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.4□□□□□ -0.58
CPSF4-208ENST00000452047 RDH11Q8TC12 318 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 UBLCP1Q8WVY7 318 aaPredicted RBP11.4□□□□□ -0.58
CPSF4-208ENST00000452047 KAT2AQ92830 837 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 VSTM2LQ96N03 204 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 TIMP4Q99727 224 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 OSBPL11Q9BXB4 747 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 SHCBP1LQ9BZQ2 653 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 C12orf65Q9H3J6 166 aaKnown RBP11.4□□□□□ -0.58
CPSF4-208ENST00000452047 METTL7AQ9H8H3 244 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 GALNT9Q9HCQ5 603 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 RRAGDQ9NQL2 400 aaPredicted RBP11.4□□□□□ -0.58
CPSF4-208ENST00000452047 GRID1Q9ULK0 1009 aa11.4□□□□□ -0.58
CPSF4-208ENST00000452047 GPR55Q9Y2T6 319 aaPredicted RBP11.4□□□□□ -0.58
CPSF4-208ENST00000452047 MED12Q93074 2177 aa11.4□□□□□ -0.59
CPSF4-208ENST00000452047 ANKHD1Q8IWZ3 2542 aaKnown RBP11.39□□□□□ -0.59
CPSF4-208ENST00000452047 C15orf38-AP3S2A0A0A6YYH1 394 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 OR6C70A6NIJ9 312 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 SMIM23A6NLE4 172 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 KDM4EB2RXH2 506 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-208ENST00000452047 FAM47E-STBD1D6RA91 191 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 H3BQF6 201 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 GNB5O14775 395 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 SNPHO15079 494 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 PLOD3O60568 738 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 NME6O75414 186 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-208ENST00000452047 TRAPPC6AO75865 159 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 BCAS2O75934 225 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-208ENST00000452047 CT45A8P0DMV1 189 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 CT45A9P0DMV2 189 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 DDCP20711 480 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 CCT5P48643 541 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 CORO7P57737 925 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 TLE4Q04727 773 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 SLC18A2Q05940 514 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 BTKQ06187 659 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 SNTA1Q13424 505 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 PRSS53Q2L4Q9 553 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 ACSF3Q4G176 576 aaPredicted RBP11.39□□□□□ -0.59
CPSF4-208ENST00000452047 CT45A2Q5DJT8 189 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 NHSL2Q5HYW2 709 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 SPDYAQ5MJ70 313 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 VASNQ6EMK4 673 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 SLC30A6Q6NXT4 461 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 ANGPTL8Q6UXH0 198 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 NPSR1Q6W5P4 371 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.39□□□□□ -0.593e-10■■■■■ 88.3
CPSF4-208ENST00000452047 PRDM14Q9GZV8 571 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 MCCC2Q9HCC0 563 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 PFDN4Q9NQP4 134 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 OXSMQ9NWU1 459 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 ALKBH4Q9NXW9 302 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 EXO1Q9UQ84 846 aaKnown RBP11.39□□□□□ -0.59
CPSF4-208ENST00000452047 SLC6A5Q9Y345 797 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 CCL27Q9Y4X3 112 aa11.39□□□□□ -0.59
CPSF4-208ENST00000452047 PRAMEF25A6NGN4 478 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 MYO1GB0I1T2 1018 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 ICOSLGO75144 302 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 RSL1D1O76021 490 aaKnown RBP11.38□□□□□ -0.59
CPSF4-208ENST00000452047 CPA3P15088 417 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 KRT4P19013 534 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 IMPG1Q17R60 797 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 ERCC6LQ2NKX8 1250 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 EIPR1Q53HC9 387 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 DCST1Q5T197 706 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 LIPMQ5VYY2 423 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 FAM71E1Q6IPT2 247 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 FAM9CQ8IZT9 166 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 C4orf33Q8N1A6 199 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 NAXEQ8NCW5 288 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 FAM83FQ8NEG4 500 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-208ENST00000452047 OR7G2Q8NG99 324 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 OR1J4Q8NGS1 313 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 FAM76AQ8TAV0 307 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 RNF138Q8WVD3 245 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 TMBIM1Q969X1 311 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 SLC35A4Q96G79 324 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 COL21A1Q96P44 957 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 UGT2B28Q9BY64 529 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 ANKZF1Q9H8Y5 726 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 FOLH1BQ9HBA9 442 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 MYNNQ9NPC7 610 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 GIMAP4Q9NUV9 329 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 TAS2R7Q9NYW3 318 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 KLRF1Q9NZS2 232 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 POLR3HQ9Y535 204 aaPredicted RBP11.38□□□□□ -0.59
CPSF4-208ENST00000452047 HIVEP1P15822 2718 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 DOCK7Q96N67 2140 aa11.38□□□□□ -0.59
CPSF4-208ENST00000452047 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 AHRRA9YTQ3 701 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 NPIPB8E9PQR5 432 aa11.37□□□□□ -0.59
CPSF4-208ENST00000452047 COPEO14579 308 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms