RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 TRIM13O60858 407 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 UGT2B11O75310 529 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 TRIM3O75382 744 aaPredicted RBP8.86□□□□□ -0.99
USP54-207ENST00000451492 ERN1O75460 977 aaKnown RBP8.86□□□□□ -0.99
USP54-207ENST00000451492 SKAP2O75563 359 aaPredicted RBP8.86□□□□□ -0.99
USP54-207ENST00000451492 CHEK2O96017 543 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 ABCB1P08183 1280 aaPredicted RBP8.86□□□□□ -0.99
USP54-207ENST00000451492 NUDT17P0C025 328 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 CREB1P16220 341 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 DDCP20711 480 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 AGAP20933 346 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 TACR1P25103 407 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 GPC1P35052 558 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 KRT20P35900 424 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 KIR3DL1P43629 444 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 RFX3P48380 749 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 HSPB3Q12988 150 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 HYAL4Q2M3T9 481 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 KRT71Q3SY84 523 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 EIPR1Q53HC9 387 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 WIPI1Q5MNZ9 446 aaPredicted RBP8.86□□□□□ -0.99
USP54-207ENST00000451492 TBCELQ5QJ74 424 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 C1orf185Q5T7R7 199 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 FAM71E1Q6IPT2 247 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 GALNT18Q6P9A2 607 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 NPSR1Q6W5P4 371 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 B3GNT6Q6ZMB0 384 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 MEX3BQ6ZN04 569 aaKnown RBP8.86□□□□□ -0.99
USP54-207ENST00000451492 GDF7Q7Z4P5 450 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 SLC44A2Q8IWA5 706 aaPredicted RBP8.86□□□□□ -0.99
USP54-207ENST00000451492 CNPY4Q8N129 248 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 RIBC1Q8N443 379 aaPredicted RBP8.86□□□□□ -0.99
USP54-207ENST00000451492 OR4N2Q8NGD1 307 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 OR1J4Q8NGS1 313 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 OR2T11Q8NH01 316 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 NEIL3Q8TAT5 605 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 ZNF675Q8TD23 568 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 TCP10LQ8TDR4 215 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 HGDQ93099 445 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 CTHRC1Q96CG8 243 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 HSPBAP1Q96EW2 488 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 PKNOX2Q96KN3 472 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 EGLN2Q96KS0 407 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 TSSK3Q96PN8 268 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 ADOQ96SZ5 270 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 ANGPTL4Q9BY76 406 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 CENPHQ9H3R5 247 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 LRTM1Q9HBL6 345 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 MYNNQ9NPC7 610 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 EQTNQ9NQ60 294 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 CAMK2AQ9UQM7 478 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 C15orf41Q9Y2V0 281 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 OR10H1Q9Y4A9 318 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 FAM215AQ9Y5M1 114 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 CSMD2Q7Z408 3487 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 CSMD1Q96PZ7 3565 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 AKAP9Q99996 3911 aa8.86□□□□□ -0.99
USP54-207ENST00000451492 A0A1B0GVC2 190 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 SERTM1A2A2V5 107 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 WDR91A4D1P6 747 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 PRAMEF25A6NGN4 478 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 C17orf51A8MQB3 221 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 KDM4EB2RXH2 506 aaPredicted RBP8.85□□□□□ -0.99
USP54-207ENST00000451492 SLC28A1O00337 649 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 PIP5K1BO14986 540 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 ACOX3O15254 700 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 PDPK1O15530 556 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 SCO2O43819 266 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 HCN1O60741 890 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 WDR1O75083 606 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 ICOSLGO75144 302 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 BCAS2O75934 225 aaPredicted RBP8.85□□□□□ -0.99
USP54-207ENST00000451492 EFNA1P20827 205 aaPredicted RBP8.85□□□□□ -0.99
USP54-207ENST00000451492 CHRNB4P30926 498 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 MPIP34949 423 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 PTGDSP41222 190 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 PPICP45877 212 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 NAA20P61599 178 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 DCAF7P61962 342 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 DCST1Q5T197 706 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 FNDC7Q5VTL7 733 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 KANK2Q63ZY3 851 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 RTL6Q6ICC9 239 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 OR5M10Q6IEU7 315 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 EMBQ6PCB8 327 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 LARP4Q71RC2 724 aaKnown RBP eCLIP8.85□□□□□ -0.99
USP54-207ENST00000451492 TRIM46Q7Z4K8 759 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 YRDCQ86U90 279 aaKnown RBP8.85□□□□□ -0.99
USP54-207ENST00000451492 ULK2Q8IYT8 1036 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 SAMD14Q8IZD0 417 aaPredicted RBP8.85□□□□□ -0.99
USP54-207ENST00000451492 FAM83FQ8NEG4 500 aaPredicted RBP8.85□□□□□ -0.99
USP54-207ENST00000451492 C17orf47Q8NEP4 570 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 FBXO30Q8TB52 745 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 TWIST2Q8WVJ9 160 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 ASB5Q8WWX0 329 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 CAVIN3Q969G5 261 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 CIDECQ96AQ7 238 aaPredicted RBP8.85□□□□□ -0.99
USP54-207ENST00000451492 C11orf24Q96F05 449 aaPredicted RBP8.85□□□□□ -0.99
USP54-207ENST00000451492 TMEM41AQ96HV5 264 aa8.85□□□□□ -0.99
USP54-207ENST00000451492 COL21A1Q96P44 957 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms