RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 A0A1B0GVC2 190 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ARRDC5A6NEK1 342 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PRAMEF25A6NGN4 478 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 A6NIN4 97 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 HEPACAM2A8MVW5 462 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ARHGEF33A8MVX0 844 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 DISC1C4P0D8 188 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 RNF223E7ERA6 249 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PRR23D1E9PI22 279 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 GPR31O00270 319 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TO15178 435 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 FFAR2O15552 330 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 GCM2O75603 506 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 GATBO75879 557 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 CPSF4O95639 269 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 PEX11BO96011 259 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 EIF4EP06730 217 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 GIPP09681 153 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 C1SP09871 688 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PRR23D2P0DMB1 279 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 PRF1P14222 555 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PKMP14618 531 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 SYN1P17600 705 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 DRD5P21918 477 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ATP5C1P36542 298 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 RGS4P49798 205 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 CAPZA1P52907 286 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PSMD4P55036 377 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 SLC10A7Q0GE19 358 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 HTR4Q13639 388 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 GANABQ14697 944 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 TRAM2Q15035 370 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 AVPI1Q5T686 147 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 C9orf57Q5W0N0 161 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 C12orf73Q69YU5 71 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 GSG1LQ6UXU4 331 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PAQR9Q6ZVX9 377 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TMUB2Q71RG4 321 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 OAFQ86UD1 273 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TAC4Q86UU9 113 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 LDLRAD3Q86YD5 345 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 SLITRK4Q8IW52 837 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ZFP82Q8N141 532 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 C11orf65Q8NCR3 313 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PXT1Q8NFP0 134 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 CHFRQ96EP1 664 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 CDKN2AIPNLQ96HQ2 116 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ZBED3Q96IU2 234 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 KLHL5Q96PQ7 755 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 HHIPQ96QV1 700 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ABHD1Q96SE0 405 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TSNAXQ99598 290 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 MED10Q9BTT4 135 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 SPON2Q9BUD6 331 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TMED9Q9BVK6 235 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ARL6Q9H0F7 186 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 C20orf85Q9H1P6 137 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ELAC1Q9H777 363 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 SARS2Q9NP81 518 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 ISYNA1Q9NPH2 558 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 EXOSC3Q9NQT5 275 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 TAS2R3Q9NYW6 316 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 MED11Q9P086 117 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PIPOXQ9P0Z9 390 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 MGAT4CQ9UBM8 478 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 CA5BQ9Y2D0 317 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TMEM129A0AVI4 362 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 FAM221BA6H8Z2 402 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 AGAP14A8MT82 685 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 H3BN98 237 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ARPC5O15511 151 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 GALR3O60755 368 aaPredicted RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 PRAMEF2O60811 474 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 SCN2BO60939 215 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 FZD7O75084 574 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 CXCL14O95715 111 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 GUCA1CO95843 209 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 SERPINA3P01011 423 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 HLA-DPB1P04440 258 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 FBP1P09467 338 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 GAAP10253 952 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 OSMP13725 252 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 ACPPP15309 386 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 HLA-DPA1P20036 260 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PTGFRP43088 359 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 XCR1P46094 333 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 NR0B1P51843 470 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 HMGA2P52926 109 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 SEC61A1P61619 476 aaKnown RBP8.14□□□□□ -1.11
LSM5-208ENST00000450169 ZXDBP98169 803 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 MTAPQ13126 283 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 UBXN2BQ14CS0 331 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 MARC1Q5VT66 337 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 AFMIDQ63HM1 303 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 IL20RBQ6UXL0 311 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 Q6ZTK2 550 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 GPRIN1Q7Z2K8 1008 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 TSPAN33Q86UF1 283 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 CLECL1Q8IZS7 167 aa8.14□□□□□ -1.11
LSM5-208ENST00000450169 PUSL1Q8N0Z8 303 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms