RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 UGT2B11O75310 529 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 RSL1D1O76021 490 aaKnown RBP13.97□□□□□ -0.17
CHD3-205ENST00000449744 TOXO94900 526 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 HPNP05981 417 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 UROSP10746 265 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 GCKP35557 465 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 SLC18A2Q05940 514 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 IFFO1Q0D2I5 559 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 SNTA1Q13424 505 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 FNDC7Q5VTL7 733 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 TIGD3Q6B0B8 471 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 TMEM81Q6P7N7 255 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 ANGPTL8Q6UXH0 198 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 TRIM46Q7Z4K8 759 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 ULK2Q8IYT8 1036 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 ZNF295-AS1Q8N0V1 137 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 FAM76AQ8TAV0 307 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 TMBIM1Q969X1 311 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 C14orf79Q96F83 325 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 COL21A1Q96P44 957 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 NODALQ96S42 347 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 STMN4Q9H169 189 aaPredicted RBP13.97□□□□□ -0.17
CHD3-205ENST00000449744 ANKZF1Q9H8Y5 726 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 ANKRA2Q9H9E1 313 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 TAS2R9Q9NYW1 312 aa13.97□□□□□ -0.17
CHD3-205ENST00000449744 GPR55Q9Y2T6 319 aaPredicted RBP13.97□□□□□ -0.17
CHD3-205ENST00000449744 NCKAP5O14513 1909 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 A0A0G2JNJ9 132 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 PRAMEF25A6NGN4 478 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 AHRRA9YTQ3 701 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 SNPHO15079 494 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 ABCB7O75027 752 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 ICOSLGO75144 302 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 COQ9O75208 318 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 SEC22BO75396 215 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 ERN1O75460 977 aaKnown RBP13.96□□□□□ -0.17
CHD3-205ENST00000449744 PTPN6P29350 595 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 IL12BP29460 328 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 NTSP30990 170 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 NCBP2P52298 156 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHD3-205ENST00000449744 PSPHP78330 225 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 CRYZQ08257 329 aaKnown RBP13.96□□□□□ -0.17
CHD3-205ENST00000449744 SF3B4Q15427 424 aaKnown RBP eCLIP13.96□□□□□ -0.17
CHD3-205ENST00000449744 CEBPEQ15744 281 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 RIPPLY2Q5TAB7 128 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 DESI1Q6ICB0 168 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 NOXRED1Q6NXP6 359 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 C10orf107Q8IVU9 208 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 PM20D2Q8IYS1 436 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 RIBC1Q8N443 379 aaPredicted RBP13.96□□□□□ -0.17
CHD3-205ENST00000449744 OR2W6PQ8NHA6 318 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 LURAP1Q96LR2 239 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 BTBD9Q96Q07 612 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 UBQLN3Q9H347 655 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 FOLH1BQ9HBA9 442 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 MYNNQ9NPC7 610 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 Q9UFV3 132 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 WBP11Q9Y2W2 641 aaKnown RBP13.96□□□□□ -0.17
CHD3-205ENST00000449744 SLC6A5Q9Y345 797 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 FIS1Q9Y3D6 152 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 ABCA12Q86UK0 2595 aa13.96□□□□□ -0.17
CHD3-205ENST00000449744 EXPH5Q8NEV8 1989 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 OR6C70A6NIJ9 312 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 MYO1GB0I1T2 1018 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 SLC28A1O00337 649 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 RGS14O43566 566 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 PLOD3O60568 738 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 TRIM13O60858 407 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 SLITRK5O94991 958 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 CHEK2O96017 543 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 JUNP05412 331 aaKnown RBP13.95□□□□□ -0.18
CHD3-205ENST00000449744 MSX1P28360 303 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 ADH7P40394 386 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 TLE4Q04727 773 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 ZNF155Q12901 538 aaPredicted RBP13.95□□□□□ -0.18
CHD3-205ENST00000449744 EFR3AQ14156 821 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 EIPR1Q53HC9 387 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 WIPI1Q5MNZ9 446 aaPredicted RBP13.95□□□□□ -0.18
CHD3-205ENST00000449744 CLEC6AQ6EIG7 209 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 FAM71E1Q6IPT2 247 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 IKBIPQ70UQ0 350 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 WDR53Q7Z5U6 358 aaPredicted RBP13.95□□□□□ -0.18
CHD3-205ENST00000449744 CLYBLQ8N0X4 340 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 ACBD4Q8NC06 268 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 OR7G2Q8NG99 324 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 DTNBP1Q96EV8 351 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 SLC35A4Q96G79 324 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 APOPT1Q96IL0 206 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 METTL2AQ96IZ6 378 aaKnown RBP13.95□□□□□ -0.18
CHD3-205ENST00000449744 VSTM2LQ96N03 204 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 ADOQ96SZ5 270 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 TIMP4Q99727 224 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 TRMOQ9BU70 441 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 GATA5Q9BWX5 397 aaPredicted RBP13.95□□□□□ -0.18
CHD3-205ENST00000449744 GALNT9Q9HCQ5 603 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 TNFRSF12AQ9NP84 129 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 NPDC1Q9NQX5 325 aaPredicted RBP13.95□□□□□ -0.18
CHD3-205ENST00000449744 MAPRE3Q9UPY8 281 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 CAMK2AQ9UQM7 478 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms