RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 CWH43Q9H720 699 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 HEBP1Q9NRV9 189 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 DNMT3BQ9UBC3 853 aaKnown RBP9.68□□□□□ -0.86
SCN10A-201ENST00000449082 FCER2P06734 321 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 CKMT1AP12532 417 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 GGT1P19440 569 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 TUBB3Q13509 450 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 TDGQ13569 410 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 RAB41Q5JT25 222 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 MCATQ8IVS2 390 aaKnown RBP9.68□□□□□ -0.86
SCN10A-201ENST00000449082 SNIP1Q8TAD8 396 aaKnown RBP9.68□□□□□ -0.86
SCN10A-201ENST00000449082 CNIH3Q8TBE1 160 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 CDH20Q9HBT6 801 aa9.68□□□□□ -0.86
SCN10A-201ENST00000449082 ZNF334Q9HCZ1 680 aaPredicted RBP9.68□□□□□ -0.86
SCN10A-201ENST00000449082 JRKO75564 520 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 SNAP29O95721 258 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ADH7P40394 386 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 PLEKHN1Q494U1 663 aaPredicted RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 LIPKQ5VXJ0 399 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ZNF517Q6ZMY9 492 aaPredicted RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 MYRFLQ96LU7 910 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 SFXN2Q96NB2 322 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ZNF700Q9H0M5 742 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 PCDHGA6Q9Y5G7 932 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 BLACEA4D250 179 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 SGK494L7N484 410 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 AFF1P51825 1210 aaKnown RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 CTXN1P60606 82 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 NPRL3Q12980 569 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 MELKQ14680 651 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 BCL2L15Q5TBC7 163 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 SAMD12Q8N8I0 201 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 FAM46AQ96IP4 442 aaKnown RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 OR6C2Q9NZP2 312 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 GSKIPQ9P0R6 139 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 KLHL42Q9P2K6 505 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 GJD2Q9UKL4 321 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 USP3Q9Y6I4 520 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 SMIM30A4D0T7 59 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 M0R129 80 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 RDH16O75452 317 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 RBBP9O75884 186 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 PNMTP11086 282 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 PYCR1P32322 319 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 NFATC4Q14934 902 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 FAM78AQ5JUQ0 283 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 BAIAP2L2Q6UXY1 529 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 LHFPL3Q86UP9 236 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ACBD7Q8N6N7 88 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ZNF709Q8N972 641 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 BOLLQ8N9W6 283 aaKnown RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 SLC37A3Q8NCC5 494 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 RNF38Q9H0F5 515 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ACAD8Q9UKU7 415 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ATXN7L1Q9ULK2 861 aaPredicted RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 RBMX2Q9Y388 322 aaKnown RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 KIF13AQ9H1H9 1805 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 SLC9B1P1A6NJY1 282 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 GKN3PP0CG01 181 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 DDCP20711 480 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 GJA4P35212 333 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 AKR1D1P51857 326 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 FXYD6P3P58550 94 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 PRPS1P60891 318 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 TLE3Q04726 772 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 C3P1Q6ZMU1 363 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 MFSD6LQ8IWD5 586 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ABHD5Q8WTS1 349 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 TCEAL3Q969E4 200 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 LRR1Q96L50 414 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 CCNL2Q96S94 520 aaPredicted RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 CPNE7Q9UBL6 633 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 EXTL2Q9UBQ6 330 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 BTNL2Q9UIR0 455 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 A0A0A6YYC8 382 aaPredicted RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 I3L1I5 382 aaPredicted RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 RGS9O75916 674 aaPredicted RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 SNAPC5O75971 98 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 ADAP00813 363 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 IFNA7P01567 189 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 PSMA6P60900 246 aaKnown RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 VWA5B2Q8N398 1253 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 NLGN4YQ8NFZ3 816 aaPredicted RBP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 CASTOR1Q8WTX7 329 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 AKAP1Q92667 903 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCN10A-201ENST00000449082 TMEM45AQ9NWC5 275 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 AP1M2Q9Y6Q5 423 aa9.67□□□□□ -0.86
SCN10A-201ENST00000449082 OR6C70A6NIJ9 312 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 GTF2F2P13984 249 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 GRPRP30550 384 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 HTR6P50406 440 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 ZNF140P52738 457 aaPredicted RBP9.66□□□□□ -0.86
SCN10A-201ENST00000449082 MOGSQ13724 837 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 RGNQ15493 299 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 FAM26DQ5JW98 314 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 C6orf141Q5SZD1 244 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 LETMD1Q6P1Q0 360 aa9.66□□□□□ -0.86
SCN10A-201ENST00000449082 DUS1LQ6P1R4 473 aaKnown RBP9.66□□□□□ -0.86
SCN10A-201ENST00000449082 TMPRSS12Q86WS5 348 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms