RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ACOT7O00154 380 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 UPK1AO00322 258 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 SLC19A2O60779 497 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 PPM1BO75688 479 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 ABCB1P08183 1280 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-204ENST00000446876 CELA3AP09093 270 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 CT45A8P0DMV1 189 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 CT45A9P0DMV2 189 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 KITP10721 976 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 LAMP1P11279 417 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 PRPS2P11908 318 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 DRD5P21918 477 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 GPC1P35052 558 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 MAGEA5P43359 124 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 TMED10P49755 219 aaKnown RBP13.62□□□□□ -0.23
HDAC4-204ENST00000446876 DCAF7P61962 342 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 C3AR1Q16581 482 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 C4orf17Q53FE4 359 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 KRTCAP3Q53RY4 240 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 CT45A2Q5DJT8 189 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 SLC44A2Q8IWA5 706 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-204ENST00000446876 SLC34A3Q8N130 599 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 GHDCQ8N2G8 530 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 OR2L13Q8N349 312 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 TMEM251Q8N6I4 163 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 OR4N2Q8NGD1 307 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 SSC4DQ8WTU2 575 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 HGDQ93099 445 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 HSPBAP1Q96EW2 488 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 JSRP1Q96MG2 331 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-204ENST00000446876 BTBD9Q96Q07 612 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 NODALQ96S42 347 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 IL1RL2Q9HB29 575 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 CNIH4Q9P003 139 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 ATP6V1HQ9UI12 483 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 TINAGQ9UJW2 476 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 C19orf53Q9UNZ5 99 aaPredicted RBP13.62□□□□□ -0.23
HDAC4-204ENST00000446876 EIF3LQ9Y262 564 aaKnown RBP13.62□□□□□ -0.23
HDAC4-204ENST00000446876 LRRK2Q5S007 2527 aa13.62□□□□□ -0.23
HDAC4-204ENST00000446876 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-204ENST00000446876 A0A1B0GTH9 108 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 PLOD2O00469 737 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 TP53I11O14683 189 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 ACOX3O15254 700 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 COQ9O75208 318 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 UGT2B11O75310 529 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 SASH3O75995 380 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 SNUPNO95149 360 aaKnown RBP13.61□□□□□ -0.23
HDAC4-204ENST00000446876 PSMG1O95456 288 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 LDLRP01130 860 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 RFPL3SP0C7P2 107 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 FRKP42685 505 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-204ENST00000446876 DIO3P55073 304 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 MANFP55145 182 aaKnown RBP13.61□□□□□ -0.23
HDAC4-204ENST00000446876 EMX2Q04743 252 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 RBPJQ06330 500 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 R3HCC1LQ7Z5L2 792 aaKnown RBP13.61□□□□□ -0.23
HDAC4-204ENST00000446876 SLC22A16Q86VW1 577 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 ZFP28Q8NHY6 868 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 MTERF3Q96E29 417 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 ZBED6CLQ96FA7 236 aaPredicted RBP13.61□□□□□ -0.23
HDAC4-204ENST00000446876 RILPQ96NA2 401 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 SH3GL2Q99962 352 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 DOHHQ9BU89 302 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 MANSC1Q9H8J5 431 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 MEAF6Q9HAF1 191 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 EQTNQ9NQ60 294 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 THAP1Q9NVV9 213 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 TAS2R9Q9NYW1 312 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 COL12A1Q99715 3063 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 PTPN13Q12923 2485 aa13.61□□□□□ -0.23
HDAC4-204ENST00000446876 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 SDHDO14521 159 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 TO15178 435 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 REM1O75628 298 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 SLITRK5O94991 958 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 ABOP16442 354 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 CASP3P42574 277 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 CA7P43166 264 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 PSG6Q00889 435 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 OCRLQ01968 901 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 ATG16L1Q676U5 607 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 SZRD1Q7Z422 152 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 SPPL2CQ8IUH8 684 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 FAM109AQ8N4B1 249 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 FBXO30Q8TB52 745 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 EFHD2Q96C19 240 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-204ENST00000446876 ZNF703Q9H7S9 590 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-204ENST00000446876 METTL7AQ9H8H3 244 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 ZDHHC11Q9H8X9 412 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 SIRT3Q9NTG7 399 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-204ENST00000446876 ACSS1Q9NUB1 689 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-204ENST00000446876 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 NOP53Q9NZM5 478 aaKnown RBP13.6□□□□□ -0.23
HDAC4-204ENST00000446876 BOKQ9UMX3 212 aaPredicted RBP13.6□□□□□ -0.23
HDAC4-204ENST00000446876 ZNF835Q9Y2P0 537 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 HRH3Q9Y5N1 445 aa13.6□□□□□ -0.23
HDAC4-204ENST00000446876 ICE1Q9Y2F5 2266 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 GOLGA8QA0A0J9YX86 632 aa13.59□□□□□ -0.23
HDAC4-204ENST00000446876 A1L4Q6 167 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms