RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 SLC16A10Q8TF71 515 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 SPRYD4Q8WW59 207 aaPredicted RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 PIGKQ92643 395 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 CLP1Q92989 425 aaKnown RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 NEIL2Q969S2 332 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 SPRTNQ9H040 489 aaPredicted RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 OSGEPL1Q9H4B0 414 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 METTL17Q9H7H0 456 aaPredicted RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 SDHAF2Q9NX18 166 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 PTGFRNQ9P2B2 879 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 IL20RAQ9UHF4 553 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 PHF11Q9UIL8 331 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 SH2B3Q9UQQ2 575 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 CASP8AP2Q9UKL3 1982 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 KIF26AQ9ULI4 1882 aaPredicted RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 GFYI3L273 518 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 KHNYNO15037 678 aaKnown RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 SLC19A2O60779 497 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 SLC16A8O95907 504 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 MT-ND4P03905 459 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 HLA-DPB1P04440 258 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 POU3F2P20265 443 aaPredicted RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 NUP62P37198 522 aaPredicted RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 RAB40BQ12829 278 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 CD276Q5ZPR3 534 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 ZNF527Q8NB42 609 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 OR8D4Q8NGM9 314 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 SMG7Q92540 1137 aaKnown RBP13.17□□□□□ -0.3
VPS52-212ENST00000445902 ZFP3Q96NJ6 502 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 SLC6A16Q9GZN6 736 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 OR6C2Q9NZP2 312 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 TMEM5Q9Y2B1 443 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 KCNMB2Q9Y691 235 aa13.17□□□□□ -0.3
VPS52-212ENST00000445902 hCG_1807616A0A1W2PRN6 198 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 HNRNPCL2B2RXH8 293 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 ANHXE9PGG2 379 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 H0YIV9 168 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 MTRF1O75570 445 aaKnown RBP13.16□□□□□ -0.3
VPS52-212ENST00000445902 IL3P08700 152 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 ATP6V1E1P36543 226 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 C16orf78Q8WTQ4 265 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 PRODHO43272 600 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 SGTAO43765 313 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 IFNA16P05015 189 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 CFL1P23528 166 aaKnown RBP13.16□□□□□ -0.3
VPS52-212ENST00000445902 ZP1P60852 638 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 CTAG1AP78358 180 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 ADGRF1Q5T601 910 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 HDDC2Q7Z4H3 204 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 TEFMQ96QE5 360 aaKnown RBP13.16□□□□□ -0.3
VPS52-212ENST00000445902 DDOQ99489 341 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 TBX5Q99593 518 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 CACNG6Q9BXT2 260 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 ABCG4Q9H172 646 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 MIEF1Q9NQG6 463 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 STOX2Q9P2F5 926 aaPredicted RBP13.16□□□□□ -0.3
VPS52-212ENST00000445902 RASD1Q9Y272 281 aa13.16□□□□□ -0.3
VPS52-212ENST00000445902 TCRBV16S1A1N1A0A5B0 115 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 SIGLEC5O15389 551 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 HPXP02790 462 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 PCSK2P16519 638 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 PITPNBP48739 271 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 AP1S2P56377 157 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 TSPAN5P62079 268 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 SIGLEC14Q08ET2 396 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 ZNF155Q12901 538 aaPredicted RBP13.15□□□□□ -0.3
VPS52-212ENST00000445902 HSPB3Q12988 150 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 VASNQ6EMK4 673 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 SLC36A4Q6YBV0 504 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 SIAH3Q8IW03 269 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 BBS1Q8NFJ9 593 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 OR5M3Q8NGP4 307 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 C2orf49Q9BVC5 232 aaPredicted RBP13.15□□□□□ -0.3
VPS52-212ENST00000445902 FNDC11Q9BVV2 318 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 SERHL2Q9H4I8 314 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 ISG20L2Q9H9L3 353 aaKnown RBP13.15□□□□□ -0.3
VPS52-212ENST00000445902 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 MRPL15Q9P015 296 aaKnown RBP13.15□□□□□ -0.3
VPS52-212ENST00000445902 HCSTQ9UBK5 93 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 RGS17Q9UGC6 210 aaPredicted RBP13.15□□□□□ -0.3
VPS52-212ENST00000445902 FKBP7Q9Y680 259 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 CCL15-CCL14A0A0B4J2E2 113 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 ATG13O75143 517 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 NAT2P11245 290 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 PTBP1P26599 531 aaKnown RBP eCLIP13.15□□□□□ -0.3
VPS52-212ENST00000445902 SHC1P29353 583 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 HOXC8P31273 242 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 VIPR1P32241 457 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 CDH11P55287 796 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 AP1S1P61966 158 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 CCL15Q16663 113 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 ESPNLQ6ZVH7 1005 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 IL17RCQ8NAC3 791 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 OR2M2Q96R28 347 aa13.15□□□□□ -0.3
VPS52-212ENST00000445902 BRF2Q9HAW0 419 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms