RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SPIN4Q56A73 249 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 DCST1Q5T197 706 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 ACSM2BQ68CK6 577 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 SLC22A9Q8IVM8 553 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 SAMD14Q8IZD0 417 aaPredicted RBP19.19■□□□□ 0.66
VSX1-206ENST00000444511 ZNF675Q8TD23 568 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 RNASE6Q93091 150 aaKnown RBP19.19■□□□□ 0.66
VSX1-206ENST00000444511 WDYHV1Q96HA8 205 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 SH3GL2Q99962 352 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 POLDIP3Q9BY77 421 aaKnown RBP19.19■□□□□ 0.66
VSX1-206ENST00000444511 ACPTQ9BZG2 426 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 SERHLQ9NQF3 203 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 GIMAP4Q9NUV9 329 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 CRIM1Q9NZV1 1036 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 FETUBQ9UGM5 382 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 MAPRE3Q9UPY8 281 aa19.19■□□□□ 0.66
VSX1-206ENST00000444511 CCDC151A5D8V7 595 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 CD8B2A6NJW9 211 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 TO15178 435 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 ACTL6AO96019 429 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 LCP2Q13094 533 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 RCAN2Q14206 197 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 HEPACAMQ14CZ8 416 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 ZNF628Q5EBL2 1059 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 IFT20Q8IY31 132 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 TMBIM1Q969X1 311 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 EXOSC8Q96B26 276 aaKnown RBP19.18■□□□□ 0.66
VSX1-206ENST00000444511 TMCO6Q96DC7 493 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 FOXD3Q9UJU5 478 aaPredicted RBP19.18■□□□□ 0.66
VSX1-206ENST00000444511 EXO1Q9UQ84 846 aaKnown RBP19.18■□□□□ 0.66
VSX1-206ENST00000444511 GPR55Q9Y2T6 319 aaPredicted RBP19.18■□□□□ 0.66
VSX1-206ENST00000444511 HIVEP1P15822 2718 aa19.18■□□□□ 0.66
VSX1-206ENST00000444511 GOLGA8RI6L899 631 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 RIPK2O43353 540 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 REM1O75628 298 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 CBR3O75828 277 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 ENO1P06733 434 aaKnown RBP19.17■□□□□ 0.66
VSX1-206ENST00000444511 PTGDSP41222 190 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 HTR6P50406 440 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 ZNF136P52737 540 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 PRKAA2P54646 552 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 PKNOX1P55347 436 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 RAE1P78406 368 aaKnown RBP19.17■□□□□ 0.66
VSX1-206ENST00000444511 HMGCS1Q01581 520 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 ERCC6LQ2NKX8 1250 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 FBXL19-AS1Q494R0 122 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 OR9A2Q8NGT5 310 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 OR14L1PQ8NHC6 308 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 KAT2AQ92830 837 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 ERP27Q96DN0 273 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 COL21A1Q96P44 957 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 GPATCH1Q9BRR8 931 aaKnown RBP19.17■□□□□ 0.66
VSX1-206ENST00000444511 EPB41L4BQ9H329 900 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 ANKRA2Q9H9E1 313 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 CALHM2Q9HA72 323 aa19.17■□□□□ 0.66
VSX1-206ENST00000444511 MBD3L4A6NDZ8 208 aaPredicted RBP19.16■□□□□ 0.66
VSX1-206ENST00000444511 MBD3L3A6NE82 208 aaPredicted RBP19.16■□□□□ 0.66
VSX1-206ENST00000444511 OR6C70A6NIJ9 312 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 MBD3L5A6NJ08 208 aaPredicted RBP19.16■□□□□ 0.66
VSX1-206ENST00000444511 ABCB7O75027 752 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 CYP4B1P13584 511 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 CTSSP25774 331 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 TIA1P31483 386 aaKnown RBP eCLIP19.16■□□□□ 0.66
VSX1-206ENST00000444511 KRT20P35900 424 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 FLYWCH1Q4VC44 716 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 POMZP3Q6PJE2 187 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 MBD3L2Q8NHZ7 208 aaPredicted RBP19.16■□□□□ 0.66
VSX1-206ENST00000444511 RDH11Q8TC12 318 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 ACMSDQ8TDX5 336 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 C16orf78Q8WTQ4 265 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 FAM222BQ8WU58 562 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 L3HYPDHQ96EM0 354 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 APIPQ96GX9 242 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 BTBD9Q96Q07 612 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 CLEC4MQ9H2X3 399 aaPredicted RBP19.16■□□□□ 0.66
VSX1-206ENST00000444511 SENP1Q9P0U3 644 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 PSMC3IPQ9P2W1 217 aaPredicted RBP19.16■□□□□ 0.66
VSX1-206ENST00000444511 TIMM22Q9Y584 194 aa19.16■□□□□ 0.66
VSX1-206ENST00000444511 ARHGAP21Q5T5U3 1957 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 EEF1E1-BLOC1S5C9J1V9 151 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 EEF1E1O43324 174 aaKnown RBP19.15■□□□□ 0.66
VSX1-206ENST00000444511 ERN1O75460 977 aaKnown RBP19.15■□□□□ 0.66
VSX1-206ENST00000444511 GSTA1P08263 222 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 PYGBP11216 843 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 OPRM1P35372 400 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 AGFG1P52594 562 aaKnown RBP19.15■□□□□ 0.66
VSX1-206ENST00000444511 IST1P53990 364 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 BTKQ06187 659 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 ENPP6Q6UWR7 440 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 CEP112Q8N8E3 955 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 WDSUB1Q8N9V3 476 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 ZPLD1Q8TCW7 415 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 DTNBP1Q96EV8 351 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 SLC35A4Q96G79 324 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 KCNA7Q96RP8 456 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 ADOQ96SZ5 270 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 EBPLQ9BY08 206 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 OR2B2Q9GZK3 357 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 SLC35C2Q9NQQ7 365 aa19.15■□□□□ 0.66
VSX1-206ENST00000444511 RASSF1Q9NS23 344 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms