RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SLC30A6Q6NXT4 461 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 ANGPTL8Q6UXH0 198 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 OR1J4Q8NGS1 313 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 TMBIM1Q969X1 311 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 TMEM41AQ96HV5 264 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 TRMOQ9BU70 441 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 GATA5Q9BWX5 397 aaPredicted RBP18.38■□□□□ 0.53
LRCH3-208ENST00000443727 MYNNQ9NPC7 610 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 WBP11Q9Y2W2 641 aaKnown RBP18.38■□□□□ 0.53
LRCH3-208ENST00000443727 NINQ8N4C6 2090 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 PKDREJQ9NTG1 2253 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 CACNA1CQ13936 2221 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 NKX2-6A6NCS4 301 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 AZIN1O14977 448 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 NME6O75414 186 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-208ENST00000443727 ERN1O75460 977 aaKnown RBP18.37■□□□□ 0.53
LRCH3-208ENST00000443727 JUNP05412 331 aaKnown RBP18.37■□□□□ 0.53
LRCH3-208ENST00000443727 ELAVL4P26378 380 aaKnown RBP18.37■□□□□ 0.53
LRCH3-208ENST00000443727 CDK9P50750 372 aaKnown RBP18.37■□□□□ 0.53
LRCH3-208ENST00000443727 TIGD3Q6B0B8 471 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 DESI1Q6ICB0 168 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 FAM71E1Q6IPT2 247 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 EMBQ6PCB8 327 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 MEX3BQ6ZN04 569 aaKnown RBP18.37■□□□□ 0.53
LRCH3-208ENST00000443727 TRABD2AQ86V40 505 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 BANPQ8N9N5 519 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 HGDQ93099 445 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 TMCO6Q96DC7 493 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 COL21A1Q96P44 957 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 FAM111AQ96PZ2 611 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 BTBD9Q96Q07 612 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 NODALQ96S42 347 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 SPOCK3Q9BQ16 436 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 OSBPL11Q9BXB4 747 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 UCK2Q9BZX2 261 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 STMN4Q9H169 189 aaPredicted RBP18.37■□□□□ 0.53
LRCH3-208ENST00000443727 LRTM1Q9HBL6 345 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 MKS1Q9NXB0 559 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 TAS2R9Q9NYW1 312 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 FAM215AQ9Y5M1 114 aa18.37■□□□□ 0.53
LRCH3-208ENST00000443727 LRBAP50851 2863 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 PRAMEF25A6NGN4 478 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 MYO1GB0I1T2 1018 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 FAM47E-STBD1D6RA91 191 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 TO15178 435 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 PLOD3O60568 738 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 ICOSLGO75144 302 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 COQ9O75208 318 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 UGT2B11O75310 529 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 SPAG7O75391 227 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 SLU7O95391 586 aaKnown RBP18.36■□□□□ 0.53
LRCH3-208ENST00000443727 HPNP05981 417 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 IL12BP29460 328 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 GCKP35557 465 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 CORO7P57737 925 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 PSPHP78330 225 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 ZNF155Q12901 538 aaPredicted RBP18.36■□□□□ 0.53
LRCH3-208ENST00000443727 SNTA1Q13424 505 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 CEBPEQ15744 281 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 RTL6Q6ICC9 239 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 IKBIPQ70UQ0 350 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 OR7G2Q8NG99 324 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 METTL2AQ96IZ6 378 aaKnown RBP18.36■□□□□ 0.53
LRCH3-208ENST00000443727 ADOQ96SZ5 270 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 FOLH1BQ9HBA9 442 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 GALNT9Q9HCQ5 603 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 C1orf109Q9NX04 203 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 LGALS13Q9UHV8 139 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 OR10H1Q9Y4A9 318 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 PTGDR2Q9Y5Y4 395 aa18.36■□□□□ 0.53
LRCH3-208ENST00000443727 C2orf72A6NCS6 295 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 OR6C70A6NIJ9 312 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 ABCB7O75027 752 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 ALDH3A1P30838 453 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 ZFP36L2P47974 494 aaKnown RBP18.35■□□□□ 0.53
LRCH3-208ENST00000443727 FNDC7Q5VTL7 733 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 SLC44A2Q8IWA5 706 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-208ENST00000443727 ULK2Q8IYT8 1036 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 AENQ8WTP8 325 aaKnown RBP18.35■□□□□ 0.53
LRCH3-208ENST00000443727 VSTM2LQ96N03 204 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 TRIM8Q9BZR9 551 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 ROPN1BQ9BZX4 212 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-208ENST00000443727 UBQLN3Q9H347 655 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 ROPN1Q9HAT0 212 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-208ENST00000443727 EML4Q9HC35 981 aaKnown RBP18.35■□□□□ 0.53
LRCH3-208ENST00000443727 TAS2R7Q9NYW3 318 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.35■□□□□ 0.53
LRCH3-208ENST00000443727 MAPRE3Q9UPY8 281 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 SLC6A5Q9Y345 797 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 PCDHGB3Q9Y5G1 929 aa18.35■□□□□ 0.53
LRCH3-208ENST00000443727 V9GYY5 206 aaPredicted RBP18.35■□□□□ 0.53
LRCH3-208ENST00000443727 SLITRK5O94991 958 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 LINC00032P0C843 101 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 CT45A8P0DMV1 189 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 CT45A9P0DMV2 189 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 NEFHP12036 1026 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 PTPN6P29350 595 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 SSTR2P30874 369 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 MC3RP41968 323 aa18.34■□□□□ 0.53
LRCH3-208ENST00000443727 EFR3AQ14156 821 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms