RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TO15178 435 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 S100BP04271 92 aaPredicted RBP12.99□□□□□ -0.33
HMGN1-208ENST00000443046 MTHFD2P13995 350 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 CPMP14384 443 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 EPB42P16452 691 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 DRD5P21918 477 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 CNTFP26441 200 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 ARL4CP56559 192 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 MAP4K2Q12851 820 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 DLG1Q12959 904 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 NNATQ16517 81 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 PRICKLE4Q2TBC4 344 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 NUDT13Q86X67 352 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 HIPK1Q86Z02 1210 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 CNEP1R1Q8N9A8 125 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 STAG3L4Q8TBR4 150 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 WDR20Q8TBZ3 569 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 TMEM171Q8WVE6 324 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 TMEM204Q9BSN7 226 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 CXorf56Q9H5V9 222 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 CES1P1Q9UKY3 287 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 CFL2Q9Y281 166 aa12.99□□□□□ -0.33
HMGN1-208ENST00000443046 OR6C70A6NIJ9 312 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 SLC22A20A6NK97 555 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 CXorf49A8MYA2 514 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-208ENST00000443046 FOXE1O00358 373 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-208ENST00000443046 GBAP04062 536 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 ATP1B1P05026 303 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 C8BP07358 591 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 PORP16435 677 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-208ENST00000443046 STMN1P16949 149 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 ATP5J2P56134 94 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 PLCXD2Q0VAA5 305 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 BEX5Q5H9J7 111 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 FAM111BQ6SJ93 734 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 ZNF704Q6ZNC4 412 aaPredicted RBP12.98□□□□□ -0.33
HMGN1-208ENST00000443046 MILR1Q7Z6M3 343 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 ZNF611Q8N823 705 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 ZNF610Q8N9Z0 462 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 TMEM158Q8WZ71 300 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 FIG4Q92562 907 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 EXT2Q93063 718 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 ZC3HAV1LQ96H79 300 aaKnown RBP12.98□□□□□ -0.33
HMGN1-208ENST00000443046 SFXN2Q96NB2 322 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 OSBPL9Q96SU4 736 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 LRRC1Q9BTT6 524 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 ALG9Q9H6U8 611 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 RNF122Q9H9V4 155 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 PRM3Q9NNZ6 103 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 MAT2BQ9NZL9 334 aa12.98□□□□□ -0.33
HMGN1-208ENST00000443046 PCNX3Q9H6A9 2034 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 A0A087X1B8 175 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-208ENST00000443046 RNF223E7ERA6 249 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 UBXN8O00124 270 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 TLX2O43763 284 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-208ENST00000443046 UGDHO60701 494 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 KERAO60938 352 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 CBX7O95931 251 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 F12P00748 615 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-208ENST00000443046 PLAUP00749 431 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 IFNA2P01563 188 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 NT5EP21589 574 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 TBXA2RP21731 343 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 PPICP45877 212 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 EMDP50402 254 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 GAS1P54826 345 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 NR1H2P55055 460 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 RAB10P61026 200 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 PDIA2Q13087 525 aaKnown RBP12.97□□□□□ -0.33
HMGN1-208ENST00000443046 FGFBP1Q14512 234 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 P4HA3Q7Z4N8 544 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 TEX9Q8N6V9 391 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 MAPK1IP1LQ8NDC0 245 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 REPS1Q96D71 796 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 TMCO6Q96DC7 493 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 SLC35A4Q96G79 324 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 ZNF845Q96IR2 970 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-208ENST00000443046 RBBP8Q99708 897 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 EHD3Q9NZN3 535 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 PPP2R2CQ9Y2T4 447 aa12.97□□□□□ -0.33
HMGN1-208ENST00000443046 GPR55Q9Y2T6 319 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-208ENST00000443046 OVOL3O00110 214 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 HS3ST1O14792 307 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 CD5LO43866 347 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 TNFRSF21O75509 655 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 SEC31AO94979 1220 aaKnown RBP12.96□□□□□ -0.33
HMGN1-208ENST00000443046 SEMA3DO95025 777 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 THBS1P07996 1170 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 PEPDP12955 493 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 PPP3CBP16298 524 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 NEK2P51955 445 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 SUCLG1P53597 346 aaKnown RBP12.96□□□□□ -0.33
HMGN1-208ENST00000443046 PHEXP78562 749 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 EXOSC7Q15024 291 aaKnown RBP12.96□□□□□ -0.33
HMGN1-208ENST00000443046 ETFDHQ16134 617 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 CLEC12BQ2HXU8 276 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 ANKRD34AQ69YU3 496 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 SLC48A1Q6P1K1 146 aa12.96□□□□□ -0.33
HMGN1-208ENST00000443046 CYS1Q717R9 158 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms