RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 PPICP45877 212 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 KIAA0040Q15053 153 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 TOMM20Q15388 145 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 CDSNQ15517 529 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 EMC4Q5J8M3 183 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 CEP85LQ5SZL2 805 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 RPRMLQ8N4K4 120 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 MARVELD2Q8N4S9 558 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.3■□□□□ 0.681e-6■■■■□ 23.9
CDKN3-204ENST00000442975 SDCCAG3Q96C92 435 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 METTL2AQ96IZ6 378 aaKnown RBP19.3■□□□□ 0.68
CDKN3-204ENST00000442975 EGLN2Q96KS0 407 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 VSTM2LQ96N03 204 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 BTBD9Q96Q07 612 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 ANGPTL4Q9BY76 406 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 FOLH1BQ9HBA9 442 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 DDX18Q9NVP1 670 aaKnown RBP19.3■□□□□ 0.68
CDKN3-204ENST00000442975 COQ3Q9NZJ6 369 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 SPRR3Q9UBC9 169 aa19.3■□□□□ 0.68
CDKN3-204ENST00000442975 EXO1Q9UQ84 846 aaKnown RBP19.3■□□□□ 0.68
CDKN3-204ENST00000442975 WBP11Q9Y2W2 641 aaKnown RBP19.3■□□□□ 0.68
CDKN3-204ENST00000442975 CENPEQ02224 2701 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 FIGNL2A6NMB9 653 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 LSM1O15116 133 aaKnown RBP19.29■□□□□ 0.68
CDKN3-204ENST00000442975 AKAP10O43572 662 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 PLOD3O60568 738 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 HCN1O60741 890 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 UGT2B11O75310 529 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 SKAP2O75563 359 aaPredicted RBP19.29■□□□□ 0.68
CDKN3-204ENST00000442975 REM1O75628 298 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 TRAPPC6AO75865 159 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 CLDN14O95500 239 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 NAGAP17050 411 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 AGAP20933 346 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 ENDOUP21128 410 aaKnown RBP19.29■□□□□ 0.68
CDKN3-204ENST00000442975 KRT20P35900 424 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 SERPINB5P36952 375 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 GXYLT1Q4G148 440 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 RNF165Q6ZSG1 346 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 Q6ZSR9 355 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 CLYBLQ8N0X4 340 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 HGDQ93099 445 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 MARVELD3Q96A59 401 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 SARAFQ96BY9 339 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 AMDHD1Q96NU7 426 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 NODALQ96S42 347 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 OSBPL11Q9BXB4 747 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 STMN4Q9H169 189 aaPredicted RBP19.29■□□□□ 0.68
CDKN3-204ENST00000442975 GLIPR2Q9H4G4 154 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 GALNT9Q9HCQ5 603 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 TAS2R9Q9NYW1 312 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 GIMAP2Q9UG22 337 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 GPR55Q9Y2T6 319 aaPredicted RBP19.29■□□□□ 0.68
CDKN3-204ENST00000442975 C15orf41Q9Y2V0 281 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 OR10H1Q9Y4A9 318 aa19.29■□□□□ 0.68
CDKN3-204ENST00000442975 C15orf38-AP3S2A0A0A6YYH1 394 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 A0A1B0GVC2 190 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 WDR91A4D1P6 747 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 PRAMEF25A6NGN4 478 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 NPIPB8E9PQR5 432 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 GNB5O14775 395 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 TO15178 435 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 PDPK1O15530 556 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 CTIFO43310 598 aaKnown RBP19.28■□□□□ 0.68
CDKN3-204ENST00000442975 SUSD5O60279 629 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 ACVR2AP27037 513 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 IL12BP29460 328 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 ARRB2P32121 409 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 SERPINB4P48594 390 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 HSPB3Q12988 150 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 ZNF630Q2M218 657 aaPredicted RBP19.28■□□□□ 0.68
CDKN3-204ENST00000442975 RFTN2Q52LD8 501 aaPredicted RBP19.28■□□□□ 0.68
CDKN3-204ENST00000442975 WLSQ5T9L3 541 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 SP5Q6BEB4 398 aaPredicted RBP19.28■□□□□ 0.68
CDKN3-204ENST00000442975 TMEM211Q6ICI0 200 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 ANGPTL8Q6UXH0 198 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 NPSR1Q6W5P4 371 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 NUP54Q7Z3B4 507 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 NUDCD3Q8IVD9 361 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 SLC44A2Q8IWA5 706 aaPredicted RBP19.28■□□□□ 0.68
CDKN3-204ENST00000442975 CA5BP1Q8WTZ4 195 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 PPCDCQ96CD2 204 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 COL21A1Q96P44 957 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 GNRHR2Q96P88 292 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 QPCTLQ9NXS2 382 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 ALKBH4Q9NXW9 302 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 BAIAP2L1Q9UHR4 511 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 TMED5Q9Y3A6 229 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 MYO7BQ6PIF6 2116 aa19.28■□□□□ 0.68
CDKN3-204ENST00000442975 HNRNPRO43390 633 aaKnown RBP19.27■□□□□ 0.68
CDKN3-204ENST00000442975 TUBBP07437 444 aa19.27■□□□□ 0.68
CDKN3-204ENST00000442975 SNRPB2P08579 225 aaKnown RBP19.27■□□□□ 0.68
CDKN3-204ENST00000442975 FGF4P08620 206 aa19.27■□□□□ 0.68
CDKN3-204ENST00000442975 CT45A8P0DMV1 189 aa19.27■□□□□ 0.68
CDKN3-204ENST00000442975 CT45A9P0DMV2 189 aa19.27■□□□□ 0.68
CDKN3-204ENST00000442975 ETV4P43268 484 aa19.27■□□□□ 0.68
CDKN3-204ENST00000442975 CT45A2Q5DJT8 189 aa19.27■□□□□ 0.68
CDKN3-204ENST00000442975 NEIL3Q8TAT5 605 aa19.27■□□□□ 0.68
CDKN3-204ENST00000442975 CIDECQ96AQ7 238 aaPredicted RBP19.27■□□□□ 0.68
CDKN3-204ENST00000442975 TMEM41AQ96HV5 264 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms