RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 DEFB115Q30KQ5 88 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 RNASE12Q5GAN4 147 aaKnown RBP6.07□□□□□ -1.44
BDNF-211ENST00000439476 Q5PR19 223 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 SPRYD7Q5W111 196 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 TNFAIP8L2Q6P589 184 aaPredicted RBP6.07□□□□□ -1.44
BDNF-211ENST00000439476 WASH2PQ6VEQ5 465 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 MRPL10Q7Z7H8 261 aaKnown RBP6.07□□□□□ -1.44
BDNF-211ENST00000439476 LHFPL3Q86UP9 236 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 SPNS2Q8IVW8 549 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 UBQLNLQ8IYU4 475 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 KREMEN2Q8NCW0 462 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 OR5AK3PQ8NH89 298 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 OR14C36Q8NHC7 312 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 NFKBIDQ8NI38 313 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 CHFRQ96EP1 664 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 LMLNQ96KR4 655 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 POTEKPQ9BYX7 375 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 UCK1Q9HA47 277 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 SMURF1Q9HCE7 757 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 ACOT13Q9NPJ3 140 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 HEBP1Q9NRV9 189 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 DNAJC27Q9NZQ0 273 aa6.07□□□□□ -1.44
BDNF-211ENST00000439476 RHPN2P1A8MT19 583 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 TARM1B6A8C7 271 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 H7C1Q1 480 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 TSPAN6O43657 245 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 SCGNO76038 276 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 FPGSQ05932 587 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 LRRC32Q14392 662 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 SMN1Q16637 294 aaKnown RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 GFOD2Q3B7J2 385 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 HSD17B12Q53GQ0 312 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PDSS1Q5T2R2 415 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PSRC1Q6PGN9 363 aaPredicted RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 AGTRAPQ6RW13 159 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 CEACAM20Q6UY09 585 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 B3GNT8Q7Z7M8 397 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 ZNF440Q8IYI8 595 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 MS4A15Q8N5U1 240 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 KDF1Q8NAX2 398 aaPredicted RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 BPIFB1Q8TDL5 484 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 ADAMTS18Q8TE60 1221 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 ZNF431Q8TF32 576 aaPredicted RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 ZNF583Q96ND8 569 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 FUZQ9BT04 418 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 ZNF385DQ9H6B1 395 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 OARD1Q9Y530 152 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 CLCA1A8K7I4 914 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 VSTM5A8MXK1 200 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 INMT-MINDY4F8WBC2 141 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PHYHO14832 338 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 SMAD9O15198 467 aaKnown RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 ZNF208O43345 1280 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PIAS2O75928 621 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 SOX14O95416 240 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PLATP00750 562 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 C8AP07357 584 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 CKMT1AP12532 417 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PFKLP17858 780 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 RAB3AP20336 220 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 ITGA3P26006 1051 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 CCL23P55773 120 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 CXCR4P61073 352 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 VLDLRP98155 873 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 ARFRP1Q13795 201 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PCBP2Q15366 365 aaKnown RBP eCLIP6.06□□□□□ -1.44
BDNF-211ENST00000439476 CYP27C1Q4G0S4 372 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 GXYLT1Q4G148 440 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 GLT8D1Q68CQ7 371 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 SLC27A4Q6P1M0 643 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 KCTD18Q6PI47 426 aaPredicted RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 ARL14EPQ8N8R7 260 aaPredicted RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 DENND6BQ8NEG7 585 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 OR9A1PQ8NGU1 263 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 CD200R1Q8TD46 325 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 TEX37Q96LM6 180 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 INPP5KQ9BT40 448 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 DOHHQ9BU89 302 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 TBL1XR1Q9BZK7 514 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 TUBB1Q9H4B7 451 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PLSCR3Q9NRY6 295 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 RHCGQ9UBD6 479 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PCDHGA9Q9Y5G4 932 aaKnown RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 DNAJC25-GNG10A0A024R161 153 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 HYKKA2RU49 373 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 C5orf51A6NDU8 294 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 SAP18O00422 153 aaKnown RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 EIF1AYO14602 144 aaKnown RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 CPNE6O95741 557 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PCCBP05166 539 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 ERCC1P07992 297 aaPredicted RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 EDNRAP25101 427 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PIGAP37287 484 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 GLP1RP43220 463 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 RAD52P43351 418 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 EIF1AXP47813 144 aaKnown RBP6.06□□□□□ -1.44
BDNF-211ENST00000439476 ACTA2P62736 377 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 ACTG2P63267 376 aa6.06□□□□□ -1.44
BDNF-211ENST00000439476 PUM1Q14671 1186 aaKnown RBP eCLIP6.06□□□□□ -1.44
BDNF-211ENST00000439476 RHEBQ15382 184 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms