RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SPNS1Q9H2V7 528 aa9.69□□□□□ -0.86
RTN4-211ENST00000438462 SNX15Q9NRS6 342 aa9.69□□□□□ -0.86
RTN4-211ENST00000438462 TREM2Q9NZC2 230 aa9.69□□□□□ -0.86
RTN4-211ENST00000438462 STARD9Q9P2P6 4700 aa9.69□□□□□ -0.86
RTN4-211ENST00000438462 ERVK-19Q9WJR5 959 aa9.69□□□□□ -0.86
RTN4-211ENST00000438462 UBR4Q5T4S7 5183 aa9.69□□□□□ -0.86
RTN4-211ENST00000438462 HECTD4Q9Y4D8 3996 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 IQANK1A0A1B0GTG1 560 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 FAM181BA6NEQ2 426 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 EFCAB8A8MWE9 144 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 H3BML4 177 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 J3QLI3 93 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 ZIC3O60481 467 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 PRKRAO75569 313 aaKnown RBP9.68□□□□□ -0.86
RTN4-211ENST00000438462 MYBL1P10243 752 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 SAGP10523 405 aaPredicted RBP9.68□□□□□ -0.86
RTN4-211ENST00000438462 PSMB4P28070 264 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 RPS3AP61247 264 aaKnown RBP9.68□□□□□ -0.86
RTN4-211ENST00000438462 ERICH6BQ5W0A0 696 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 STRA8Q7Z7C7 330 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 EXOC3L1Q86VI1 746 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 PLCZ1Q86YW0 608 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 RFX6Q8HWS3 928 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 TRIM11Q96F44 468 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 MAK16Q9BXY0 300 aaKnown RBP9.68□□□□□ -0.86
RTN4-211ENST00000438462 PCBD2Q9H0N5 130 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 ASH2LQ9UBL3 628 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 ZNF69Q9UC07 566 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 OPN4Q9UHM6 478 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 FEZ2Q9UHY8 353 aaPredicted RBP9.68□□□□□ -0.86
RTN4-211ENST00000438462 AAR2Q9Y312 384 aaKnown RBP9.68□□□□□ -0.86
RTN4-211ENST00000438462 RNF114Q9Y508 228 aa9.68□□□□□ -0.86
RTN4-211ENST00000438462 LYNX1G3V0Z9 82 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 M0R1B8 84 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 WNT9BO14905 357 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 B3GALT2O43825 422 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 CLPXO76031 633 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 LYNX1P0DP58 116 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 PECAM1P16284 738 aaPredicted RBP9.67□□□□□ -0.86
RTN4-211ENST00000438462 PSMA3P25788 255 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 CNTFP26441 200 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 STT3AP46977 705 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 SCTRP47872 440 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 IDH3GP51553 393 aaPredicted RBP9.67□□□□□ -0.86
RTN4-211ENST00000438462 LIM2P55344 173 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 EFTUD2Q15029 972 aaKnown RBP eCLIP9.67□□□□□ -0.864e-14■■■■■ 28.8
RTN4-211ENST00000438462 ACSBG2Q5FVE4 666 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 TIMM23BQ5SRD1 257 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 CCDC181Q5TID7 509 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 RAET1LQ5VY80 246 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 FOXB2Q5VYV0 432 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 TMEM81Q6P7N7 255 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 RAD9BQ6WBX8 426 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 ZNF534Q76KX8 674 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 TBC1D1Q86TI0 1168 aaPredicted RBP9.67□□□□□ -0.86
RTN4-211ENST00000438462 OR13J1Q8NGT2 312 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 PPWD1Q96BP3 646 aaKnown RBP9.67□□□□□ -0.86
RTN4-211ENST00000438462 COL21A1Q96P44 957 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 RAB1BQ9H0U4 201 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 P2RY12Q9H244 342 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 PIH1D1Q9NWS0 290 aaKnown RBP9.67□□□□□ -0.86
RTN4-211ENST00000438462 C1RLQ9NZP8 487 aa9.67□□□□□ -0.86
RTN4-211ENST00000438462 FBXO9Q9UK97 447 aaPredicted RBP9.67□□□□□ -0.86
RTN4-211ENST00000438462 C2orf92A0A1B0GVN3 265 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 MROH6A6NGR9 719 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 C3orf70A6NLC5 250 aaPredicted RBP9.66□□□□□ -0.86
RTN4-211ENST00000438462 NDUFA7O95182 113 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 CLPSP04118 112 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 ABCB1P08183 1280 aaPredicted RBP9.66□□□□□ -0.86
RTN4-211ENST00000438462 ZFXP17010 805 aaPredicted RBP9.66□□□□□ -0.86
RTN4-211ENST00000438462 KRT15P19012 456 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 ARNTP27540 789 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 PPOXP50336 477 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 NRG3P56975 720 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 TNFRSF17Q02223 184 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 DCAF12L2Q5VW00 463 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 ITPRIPL1Q6GPH6 555 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 ADNP2Q6IQ32 1131 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 KLHL17Q6TDP4 642 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 CARM1Q86X55 608 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 OR4N5Q8IXE1 308 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 TBC1D19Q8N5T2 526 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 ANKRD53Q8N9V6 530 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 OR5M1Q8NGP8 315 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 GAL3ST3Q96A11 431 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 C7orf69Q9H7B7 122 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 GLRX2Q9NS18 164 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 TAB2Q9NYJ8 693 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 TAS2R16Q9NYV7 291 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 DAPP1Q9UN19 280 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 MRPS18CQ9Y3D5 142 aaKnown RBP9.66□□□□□ -0.86
RTN4-211ENST00000438462 ZNF337Q9Y3M9 751 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 TSC22D4Q9Y3Q8 395 aa9.66□□□□□ -0.86
RTN4-211ENST00000438462 PRAMEF25A6NGN4 478 aa9.65□□□□□ -0.86
RTN4-211ENST00000438462 OR6C76A6NM76 312 aa9.65□□□□□ -0.86
RTN4-211ENST00000438462 ZNF487B1APH4 448 aa9.65□□□□□ -0.86
RTN4-211ENST00000438462 B4DXG7 233 aa9.65□□□□□ -0.86
RTN4-211ENST00000438462 ERI3O43414 337 aaKnown RBP9.65□□□□□ -0.86
RTN4-211ENST00000438462 NIPSNAP2O75323 286 aa9.65□□□□□ -0.86
RTN4-211ENST00000438462 SLITRK5O94991 958 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms