RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 UQCRHLA0A096LP55 91 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ESYT3A0FGR9 886 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 C1orf226A1L170 272 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 FAM221AA4D161 298 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 PRAMEF25A6NGN4 478 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 LRRC14BA6NHZ5 514 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 CD8B2A6NJW9 211 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 PGRMC2O15173 223 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 PPM1BO75688 479 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 KRT38O76015 456 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ACTL6AO96019 429 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 RAF1P04049 648 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 HPNP05981 417 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 TMIGD3P0DMS9 266 aaPredicted RBP7.09□□□□□ -1.27
VPS50-204ENST00000438395 DRD2P14416 443 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 NAGAP17050 411 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 CSNK2A2P19784 350 aaPredicted RBP7.09□□□□□ -1.27
VPS50-204ENST00000438395 KLK2P20151 261 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 CTSSP25774 331 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ABCD3P28288 659 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 TIMP3P35625 211 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 CASP3P42574 277 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ALDH9A1P49189 494 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 SERPINB9P50453 376 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 WNT3P56703 355 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 SORDQ00796 357 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 FUT7Q11130 342 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ERCC6LQ2NKX8 1250 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 FBXL19-AS1Q494R0 122 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 WIPI1Q5MNZ9 446 aaPredicted RBP7.09□□□□□ -1.27
VPS50-204ENST00000438395 NSUN5P2Q63ZY6 315 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 TIGD3Q6B0B8 471 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 VASNQ6EMK4 673 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 SLC30A6Q6NXT4 461 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 CHMP1BQ7LBR1 199 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 COMMD6Q7Z4G1 85 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 MILR1Q7Z6M3 343 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 YRDCQ86U90 279 aaKnown RBP7.09□□□□□ -1.27
VPS50-204ENST00000438395 CDC20BQ86Y33 519 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 TGIF2LYQ8IUE0 185 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ZNF441Q8N8Z8 693 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ADCY4Q8NFM4 1077 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 OR52B6Q8NGF0 335 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 WDR20Q8TBZ3 569 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 TMEM41AQ96HV5 264 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 MEGF10Q96KG7 1140 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 GNRHR2Q96P88 292 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ALPK1Q96QP1 1244 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 TM9SF2Q99805 663 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
VPS50-204ENST00000438395 ZNF717Q9BY31 904 aaPredicted RBP7.09□□□□□ -1.27
VPS50-204ENST00000438395 UGT2B28Q9BY64 529 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 PRDM14Q9GZV8 571 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 TSPYL1Q9H0U9 437 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 NXF5Q9H1B4 397 aaKnown RBP7.09□□□□□ -1.27
VPS50-204ENST00000438395 ACBD3Q9H3P7 528 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 ACSS3Q9H6R3 686 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 SERHLQ9NQF3 203 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 PSD3Q9NYI0 1048 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 XPR1Q9UBH6 696 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 PRODH2Q9UF12 536 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 DKKL1Q9UK85 242 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 PYCARDQ9ULZ3 195 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 MAPRE3Q9UPY8 281 aa7.09□□□□□ -1.27
VPS50-204ENST00000438395 WASHC1A8K0Z3 465 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 CLCA1A8K7I4 914 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 STX16-NPEPL1H3BU86 382 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 STX16O14662 325 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 CASKO14936 926 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 GOSR1O95249 250 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 KRT6AP02538 564 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 ALDOAP04075 364 aaKnown RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 KRT6BP04259 564 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 ABCB1P08183 1280 aaPredicted RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 RHOXF2BP0C7M4 288 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 BMP7P18075 431 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 GPX3P22352 226 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 CNTFP26441 200 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 IL12BP29460 328 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 CEACAM8P31997 349 aaPredicted RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 SOX18P35713 384 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 FEN1P39748 380 aaKnown RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 KRT6CP48668 564 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 DIO3P55073 304 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 DCAF7P61962 342 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 PSPHP78330 225 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 MRPS22P82650 360 aaKnown RBP7.08□□□□□ -1.28
VPS50-204ENST00000438395 SRYQ05066 204 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 TRAF3Q13114 568 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 SNTA1Q13424 505 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 EIPR1Q53HC9 387 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 TECRLQ5HYJ1 363 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 TEX35Q5T0J7 233 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 SLC48A1Q6P1K1 146 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 AAGABQ6PD74 315 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 ZDHHC24Q6UX98 284 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 PAMR1Q6UXH9 720 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 SYT10Q6XYQ8 523 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 NUP54Q7Z3B4 507 aa7.08□□□□□ -1.28
VPS50-204ENST00000438395 IFNEQ86WN2 208 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms