RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ECI1P42126 302 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CSNK2A1P68400 391 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 LRRC32Q14392 662 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 SPANXN4Q5MJ08 99 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 LINC00299Q6ZSB3 139 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 FAM124AQ86V42 546 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 FAM58AQ8N1B3 248 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CSNK2A3Q8NEV1 391 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 OR2T4Q8NH00 348 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CHAC2Q8WUX2 184 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 C7orf43Q8WVR3 580 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 COQ3Q9NZJ6 369 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 SAP18O00422 153 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 ERI3O43414 337 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 TYROBPO43914 113 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 C6orf47O95873 294 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 FHP07954 510 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CDK4P11802 303 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 RNH1P13489 461 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 EFNA1P20827 205 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 HMGCS1Q01581 520 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 KCNJ8Q15842 424 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 ODF4Q2M2E3 257 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CILP2Q8IUL8 1156 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 PGAM5Q96HS1 289 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 A0A1W2PPV4 95 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 TMEM150BA6NC51 233 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 BTBD17A6NE02 478 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 GKP32189 559 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 TAF10Q12962 218 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 FLYWCH1Q4VC44 716 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 BRICD5Q6PL45 260 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 NDNFQ8TB73 568 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 NAA11Q9BSU3 229 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CERS4Q9HA82 394 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 TTC3P53804 2025 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 SLC22A23A1A5C7 686 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 MTMR11A4FU01 709 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 SEC14L5O43304 696 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 MSI1O43347 362 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 GLUD1P00367 558 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 AK4P27144 223 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 PYCR1P32322 319 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 GSTM4Q03013 218 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 TARBP2Q15633 366 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 DUSP6Q16828 381 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 DEFB115Q30KQ5 88 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 PAN3Q58A45 887 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 C1orf87Q8N0U7 546 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 LRRN4Q8WUT4 740 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 WDR26Q9H7D7 661 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 SARDHQ9UL12 918 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 KCNQ2O43526 872 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 FUT4P22083 530 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 GCGRP47871 477 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 SOX2P48431 317 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CX3CR1P49238 355 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 KIAA0907Q7Z7F0 614 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 IRF2BP1Q8IU81 584 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 PMEPA1Q969W9 287 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 KIAA1143Q96AT1 154 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 IL21RQ9HBE5 538 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 A0A0U1RQK1 487 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 MRPL3P09001 348 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CDKN1CP49918 316 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 TAP2Q03519 686 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 MZT1Q08AG7 82 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 RBMS2Q15434 407 aaKnown RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 BAGE3Q86Y29 109 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 BAGE2Q86Y30 109 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CMASQ8NFW8 434 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 OR6K2Q8NGY2 324 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 IL12RB2Q99665 862 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 OCSTAMPQ9BR26 566 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 VRTNQ9H8Y1 702 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 POLMQ9NP87 494 aaPredicted RBP11.01□□□□□ -0.65
PTCH1-209ENST00000437951 IL26Q9NPH9 171 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 TAS2R16Q9NYV7 291 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 CHRNA9Q9UGM1 479 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 DKKL1Q9UK85 242 aa11.01□□□□□ -0.65
PTCH1-209ENST00000437951 SMIM30A4D0T7 59 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 CLDN24A6NM45 220 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 MEIS2O14770 477 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 FANCGO15287 622 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 TRAPPC2P0DI81 140 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 TRAPPC2BP0DI82 140 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 PRPS1P60891 318 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 COL13A1Q5TAT6 717 aaPredicted RBP11□□□□□ -0.65
PTCH1-209ENST00000437951 PLAG1Q6DJT9 500 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 PHOSPHO1Q8TCT1 267 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 ST7LQ8TDW4 575 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 ZBTB8AQ96BR9 441 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 SHDQ96IW2 340 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 PINK1Q9BXM7 581 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 MMP28Q9H239 520 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 OPA3Q9H6K4 179 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 A0A087WZY1 265 aa11□□□□□ -0.65
PTCH1-209ENST00000437951 RPS17P08708 135 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms