RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C17orf82Q86X59 251 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-216ENST00000437340 ARHGEF39Q8N4T4 335 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 SVOPQ8N4V2 548 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 PRRC1Q96M27 445 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 IER2Q9BTL4 223 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 ERVK-18Q9QC07 812 aa24.07■■□□□ 1.44
CPNE1-216ENST00000437340 POU2F1P14859 743 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 MAPK10P53779 464 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 CRISP1P54107 249 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 RAB38P57729 211 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 RPL6Q02878 288 aaKnown RBP24.06■■□□□ 1.44
CPNE1-216ENST00000437340 CHRNEQ04844 493 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 SEC23BQ15437 767 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 SMN1Q16637 294 aaKnown RBP24.06■■□□□ 1.44
CPNE1-216ENST00000437340 ZNF311Q5JNZ3 666 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 DHRS4L2Q6PKH6 230 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 OR6T1Q8NGN1 323 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 EDAQ92838 391 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 DGCR6LQ9BY27 220 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 UCK2Q9BZX2 261 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 ANKHQ9HCJ1 492 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 PCDHGA10Q9Y5H3 936 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 MUC3AQ02505 3323 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 ZAR1LA6NP61 321 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 PLOD3O60568 738 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 CDC42P60953 191 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 SHC2P98077 582 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 DMWDQ09019 674 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 FHL5Q5TD97 284 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 MCATQ8IVS2 390 aaKnown RBP24.06■■□□□ 1.44
CPNE1-216ENST00000437340 TMEFF1Q8IYR6 380 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 SLC16A11Q8NCK7 471 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 RAB2BQ8WUD1 216 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 FNDC11Q9BVV2 318 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 LIN28AQ9H9Z2 209 aaKnown RBP24.06■■□□□ 1.44
CPNE1-216ENST00000437340 TIMMDC1Q9NPL8 285 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 FTSJ1Q9UET6 329 aa24.06■■□□□ 1.44
CPNE1-216ENST00000437340 SH3PXD2BA1X283 911 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 ZNF99A8MXY4 864 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-216ENST00000437340 FGF17O60258 216 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 OR10H3O60404 316 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 MPZL2O60487 215 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 PROS1P07225 676 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 GABRB1P18505 474 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 PRKAR1BP31321 381 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 SOX18P35713 384 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 PIN1Q13526 163 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-216ENST00000437340 PTGES3Q15185 160 aaKnown RBP24.05■■□□□ 1.44
CPNE1-216ENST00000437340 PRTGQ2VWP7 1150 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 EXOSC6Q5RKV6 272 aaKnown RBP24.05■■□□□ 1.44
CPNE1-216ENST00000437340 NIPAL1Q6NVV3 410 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 ABCA7Q8IZY2 2146 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 DNAJC22Q8N4W6 341 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 OR5T3Q8NGG3 340 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 SLC7A13Q8TCU3 470 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 ZNF675Q8TD23 568 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 FAR1Q8WVX9 515 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 TCTN2Q96GX1 697 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 SIGLEC11Q96RL6 698 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 ARHGDIGQ99819 225 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 SLC13A4Q9UKG4 626 aa24.05■■□□□ 1.44
CPNE1-216ENST00000437340 SLC9B1P1A6NJY1 282 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 HCRTR1O43613 425 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 OSMP13725 252 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 CHMP24386 653 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 MAOBP27338 520 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 IDH2P48735 452 aaKnown RBP24.04■■□□□ 1.44
CPNE1-216ENST00000437340 UGT2B15P54855 530 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 HNRNPKP61978 463 aaKnown RBP eCLIP24.04■■□□□ 1.44
CPNE1-216ENST00000437340 SKP1P63208 163 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 ILKQ13418 452 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 ARHGAP11BQ3KRB8 267 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 ZCCHC12Q6PEW1 402 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 RORBQ92753 470 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 SLC38A3Q99624 504 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 MTHFD2LQ9H903 347 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-216ENST00000437340 IMPAD1Q9NX62 359 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 IFT52Q9Y366 437 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 TDRD6O60522 2096 aaKnown RBP24.04■■□□□ 1.44
CPNE1-216ENST00000437340 NINQ8N4C6 2090 aa24.04■■□□□ 1.44
CPNE1-216ENST00000437340 NXPH1P58417 271 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 PGBD2Q6P3X8 592 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 SLC36A4Q6YBV0 504 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 TMEM52Q8NDY8 209 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 SPACA7Q96KW9 195 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 PIGUQ9H490 435 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 ZNF226Q9NYT6 803 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 REV1Q9UBZ9 1251 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 KNL1Q8NG31 2342 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 LMO7DNF2Z398 122 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 FAM227AF5H4B4 570 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 SGK494L7N484 410 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 AQP9O43315 295 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 LDB3O75112 727 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 ATE1O95260 518 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 GSSP48637 474 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 PDX1P52945 283 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 OGFOD3Q6PK18 319 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 TSSK4Q6SA08 328 aa24.03■■□□□ 1.44
CPNE1-216ENST00000437340 CD300LDQ6UXZ3 194 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms