RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 IKBIPQ70UQ0 350 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 GDF7Q7Z4P5 450 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 RPRMLQ8N4K4 120 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 NEIL3Q8TAT5 605 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 AENQ8WTP8 325 aaKnown RBP16.11■□□□□ 0.17
NUP50-208ENST00000430547 TMEM41AQ96HV5 264 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 METTL2AQ96IZ6 378 aaKnown RBP16.11■□□□□ 0.17
NUP50-208ENST00000430547 GATA5Q9BWX5 397 aaPredicted RBP16.11■□□□□ 0.17
NUP50-208ENST00000430547 OSBPL11Q9BXB4 747 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 EML4Q9HC35 981 aaKnown RBP16.11■□□□□ 0.17
NUP50-208ENST00000430547 TNFRSF12AQ9NP84 129 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 TAS2R9Q9NYW1 312 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 SPRR3Q9UBC9 169 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.11■□□□□ 0.17
NUP50-208ENST00000430547 V9GYY5 206 aaPredicted RBP16.11■□□□□ 0.17
NUP50-208ENST00000430547 HCFC1P51610 2035 aa16.11■□□□□ 0.17
NUP50-208ENST00000430547 FAM90A27PA6NNH2 459 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 COQ9O75208 318 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 SPAG7O75391 227 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 REM1O75628 298 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 SLITRK5O94991 958 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 JUNP05412 331 aaKnown RBP16.1■□□□□ 0.17
NUP50-208ENST00000430547 HOXD4P09016 255 aaPredicted RBP16.1■□□□□ 0.17
NUP50-208ENST00000430547 IL12BP29460 328 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 SOX18P35713 384 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 PSPHP78330 225 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 ZNF155Q12901 538 aaPredicted RBP16.1■□□□□ 0.17
NUP50-208ENST00000430547 CEBPEQ15744 281 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 FAM71E1Q6IPT2 247 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 SLC30A6Q6NXT4 461 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 ANGPTL8Q6UXH0 198 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 OR1J4Q8NGS1 313 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 CAVIN3Q969G5 261 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 TMBIM1Q969X1 311 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 TMCO6Q96DC7 493 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 GNRHR2Q96P88 292 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 BTBD9Q96Q07 612 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 ANKRA2Q9H9E1 313 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 LRTM1Q9HBL6 345 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 C1orf109Q9NX04 203 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 GPR55Q9Y2T6 319 aaPredicted RBP16.1■□□□□ 0.17
NUP50-208ENST00000430547 C15orf41Q9Y2V0 281 aa16.1■□□□□ 0.17
NUP50-208ENST00000430547 MYO1GB0I1T2 1018 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 FAM47E-STBD1D6RA91 191 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 C19orf84I3L1E1 186 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 GNB5O14775 395 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 TO15178 435 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 PLOD3O60568 738 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 ABCB7O75027 752 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 UGT2B11O75310 529 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 ENDOUP21128 410 aaKnown RBP16.09■□□□□ 0.17
NUP50-208ENST00000430547 PRPH2P23942 346 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 ALDH3A1P30838 453 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 GCKP35557 465 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 SNTA1Q13424 505 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 C1orf185Q5T7R7 199 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 TMEM81Q6P7N7 255 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 CCDC71Q8IV32 467 aaPredicted RBP16.09■□□□□ 0.17
NUP50-208ENST00000430547 DDIASQ8IXT1 998 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 OR7G2Q8NG99 324 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 TCP10LQ8TDR4 215 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 HGDQ93099 445 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 COL21A1Q96P44 957 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 TTYH2Q9BSA4 534 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 MECRQ9BV79 373 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 FOLH1BQ9HBA9 442 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 KCNJ16Q9NPI9 418 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 SLC17A7Q9P2U7 560 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 OR10H1Q9Y4A9 318 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 PTGDR2Q9Y5Y4 395 aa16.09■□□□□ 0.17
NUP50-208ENST00000430547 PRAMEF25A6NGN4 478 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 OR6C70A6NIJ9 312 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 ZNF500O60304 480 aaPredicted RBP16.08■□□□□ 0.16
NUP50-208ENST00000430547 NPHS1O60500 1241 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 HPNP05981 417 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 PRF1P14222 555 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 MC3RP41968 323 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 CDK9P50750 372 aaKnown RBP16.08■□□□□ 0.16
NUP50-208ENST00000430547 CORO7P57737 925 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 RPL38P63173 70 aaKnown RBP16.08■□□□□ 0.16
NUP50-208ENST00000430547 EFR3AQ14156 821 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 KANK2Q63ZY3 851 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 TIGD3Q6B0B8 471 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 TMEM107Q6UX40 140 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 SLC44A2Q8IWA5 706 aaPredicted RBP16.08■□□□□ 0.16
NUP50-208ENST00000430547 LILRB4Q8NHJ6 448 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.08■□□□□ 0.16
NUP50-208ENST00000430547 DTNBP1Q96EV8 351 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 VSTM2LQ96N03 204 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 NODALQ96S42 347 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 UBQLN3Q9H347 655 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 DDX18Q9NVP1 670 aaKnown RBP16.08■□□□□ 0.16
NUP50-208ENST00000430547 TAS2R7Q9NYW3 318 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 PCDHGB3Q9Y5G1 929 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 FAM215AQ9Y5M1 114 aa16.08■□□□□ 0.16
NUP50-208ENST00000430547 INTS1Q8N201 2190 aaKnown RBP16.07■□□□□ 0.16
NUP50-208ENST00000430547 A0A087WV62 115 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 ICOSLGO75144 302 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 LINC00032P0C843 101 aa16.07■□□□□ 0.16
NUP50-208ENST00000430547 CT45A8P0DMV1 189 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms