RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 ANGPT4Q9Y264 503 aa7.88□□□□□ -1.15
CD44-208ENST00000428726 TPRKBQ9Y3C4 175 aa7.88□□□□□ -1.15
CD44-208ENST00000428726 A0A1W2PPK0 400 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 C5orf67F2Z3F1 127 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 AP3D1O14617 1153 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 DVL2O14641 736 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 CCNB2O95067 398 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 GYPBP06028 91 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 ZNF12P17014 697 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 ITIH1P19827 911 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 PGDP52209 483 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 SLC35A2P78381 396 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 MFSD4BQ5TF39 518 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 KIAA1161Q6NSJ0 714 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 ACSM5Q6NUN0 579 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 CDC73Q6P1J9 531 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 NKAIN4Q8IVV8 208 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 RSC1A1Q92681 617 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 CDS1Q92903 461 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 MTERF3Q96E29 417 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 AMDHD1Q96NU7 426 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 EPYCQ99645 322 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 HMG20AQ9NP66 347 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 MYNNQ9NPC7 610 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 SLC35C2Q9NQQ7 365 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 QPCTLQ9NXS2 382 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 HCN3Q9P1Z3 774 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 ENPP5Q9UJA9 477 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 CLEC4AQ9UMR7 237 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 PADI2Q9Y2J8 665 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 PCDHGB1Q9Y5G3 927 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 TMEM221A6NGB7 291 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 EFCAB9A8MZ26 197 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 PEX12O00623 359 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 CTDSP2O14595 271 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 AQP9O43315 295 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 FHP07954 510 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 NT5EP21589 574 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 TRHRP34981 398 aaPredicted RBP7.87□□□□□ -1.15
CD44-208ENST00000428726 SERPINB10P48595 397 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 TPMTP51580 245 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 PDX1P52945 283 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 MAZP56270 477 aaKnown RBP7.87□□□□□ -1.15
CD44-208ENST00000428726 RPS21P63220 83 aaKnown RBP7.87□□□□□ -1.15
CD44-208ENST00000428726 SHC2P98077 582 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 RBBP4Q09028 425 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 PDE7AQ13946 482 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 KCNAB1Q14722 419 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 TAB1Q15750 504 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 ARMCX4Q5H9R4 360 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 LIPKQ5VXJ0 399 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 PODNL1Q6PEZ8 512 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 HSDL2Q6YN16 418 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 CELF2-AS1Q8N7Q2 184 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 OR4N2Q8NGD1 307 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 MUL1Q969V5 352 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 MS4A6EQ96DS6 147 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 NECTIN4Q96NY8 510 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 ZNF347Q96SE7 839 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 MESP1Q9BRJ9 268 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 POLR2J3Q9H1A7 115 aaKnown RBP7.87□□□□□ -1.15
CD44-208ENST00000428726 RSPH9Q9H1X1 276 aaPredicted RBP7.87□□□□□ -1.15
CD44-208ENST00000428726 FAM60AQ9NP50 221 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 ABCB9Q9NP78 766 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 FSCN3Q9NQT6 498 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 HRASLS2Q9NWW9 162 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 NLGN3Q9NZ94 848 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 MAT2BQ9NZL9 334 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 SLC9A8Q9Y2E8 581 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 NBEAQ8NFP9 2946 aa7.87□□□□□ -1.15
CD44-208ENST00000428726 RP1L1Q8IWN7 2480 aaPredicted RBP7.87□□□□□ -1.15
CD44-208ENST00000428726 CDC14CA4D256 554 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 HTR3EA5X5Y0 456 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 M0R082 166 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 PSMD9O00233 223 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 AIREO43918 545 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 JUNDP17535 347 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 HIST1H1TP22492 207 aaPredicted RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 MLLT3P42568 568 aaPredicted RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 PCYT1AP49585 367 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 XKP51811 444 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FCHO2Q0JRZ9 810 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 RPA4Q13156 261 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FADDQ13158 208 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ELOAQ14241 798 aaKnown RBP7.86□□□□□ -1.15
CD44-208ENST00000428726 MICAQ29983 383 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 DCST1Q5T197 706 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 UBE2UQ5VVX9 321 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 NIPAL1Q6NVV3 410 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FAHD1Q6P587 224 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 LCTLQ6UWM7 567 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 USP53Q70EK8 1073 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 C16orf62Q7Z3J2 963 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 ZAR1Q86SH2 424 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 SYT14Q8NB59 555 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 AVL9Q8NBF6 648 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 FNDC11Q9BVV2 318 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 DCSTAMPQ9H295 470 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 AHSPQ9NZD4 102 aa7.86□□□□□ -1.15
CD44-208ENST00000428726 USP36Q9P275 1121 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms