RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 FETUBQ9UGM5 382 aa15.03■□□□□ -0
VARS-216ENST00000428445 ZNF639Q9UID6 485 aa15.03■□□□□ -0
VARS-216ENST00000428445 FBXL2Q9UKC9 423 aa15.03■□□□□ -0
VARS-216ENST00000428445 TMCO1Q9UM00 188 aa15.03■□□□□ -0
VARS-216ENST00000428445 SLC12A4Q9UP95 1085 aa15.03■□□□□ -0
VARS-216ENST00000428445 EXO1Q9UQ84 846 aaKnown RBP15.03■□□□□ -0
VARS-216ENST00000428445 WIF1Q9Y5W5 379 aa15.03■□□□□ -0
VARS-216ENST00000428445 TGM6O95932 706 aa15.02■□□□□ -0
VARS-216ENST00000428445 PDYNP01213 254 aa15.02■□□□□ -0
VARS-216ENST00000428445 INHBBP09529 407 aa15.02■□□□□ -0
VARS-216ENST00000428445 DEKP35659 375 aaKnown RBP15.02■□□□□ -0
VARS-216ENST00000428445 ALDH9A1P49189 494 aa15.02■□□□□ -0
VARS-216ENST00000428445 EMDP50402 254 aa15.02■□□□□ -0
VARS-216ENST00000428445 FAM27E3Q08E93 113 aa15.02■□□□□ -0
VARS-216ENST00000428445 GALNT1Q10472 559 aaPredicted RBP15.02■□□□□ -0
VARS-216ENST00000428445 SLC30A6Q6NXT4 461 aa15.02■□□□□ -0
VARS-216ENST00000428445 CLEC9AQ6UXN8 241 aa15.02■□□□□ -0
VARS-216ENST00000428445 COMMD6Q7Z4G1 85 aa15.02■□□□□ -0
VARS-216ENST00000428445 MILR1Q7Z6M3 343 aa15.02■□□□□ -0
VARS-216ENST00000428445 ADGRE4PQ86SQ3 457 aa15.02■□□□□ -0
VARS-216ENST00000428445 BIVMQ86UB2 503 aa15.02■□□□□ -0
VARS-216ENST00000428445 CXorf67Q86X51 503 aaPredicted RBP15.02■□□□□ -0
VARS-216ENST00000428445 TRPC4APQ8TEL6 797 aa15.02■□□□□ -0
VARS-216ENST00000428445 TMBIM1Q969X1 311 aa15.02■□□□□ -0
VARS-216ENST00000428445 DACH2Q96NX9 599 aa15.02■□□□□ -0
VARS-216ENST00000428445 NTMT1Q9BV86 223 aa15.02■□□□□ -0
VARS-216ENST00000428445 ADAM29Q9UKF5 820 aa15.02■□□□□ -0
VARS-216ENST00000428445 PCTPQ9UKL6 214 aa15.02■□□□□ -0
VARS-216ENST00000428445 HEATR5AQ86XA9 2040 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 PRAMEF25A6NGN4 478 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 PLOD2O00469 737 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 SIAH2O43255 324 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 REM1O75628 298 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 CBR3O75828 277 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 CTAGE8P0CG41 777 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 NAGAP17050 411 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 PHBP35232 272 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 CPOXP36551 454 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 LHX2P50458 406 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 CDH13P55290 713 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 GFRA1P56159 465 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 TCHHL1Q5QJ38 904 aaPredicted RBP15.01□□□□□ -0.01
VARS-216ENST00000428445 PAGE2Q7Z2X7 111 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 CTAGE4Q8IX94 777 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 KLHL29Q96CT2 875 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 CNRIP1Q96F85 164 aaPredicted RBP15.01□□□□□ -0.01
VARS-216ENST00000428445 OR2B2Q9GZK3 357 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 ZNF395Q9H8N7 513 aaPredicted RBP15.01□□□□□ -0.01
VARS-216ENST00000428445 TAS2R10Q9NYW0 307 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 CLCF1Q9UBD9 225 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 HEY2Q9UBP5 337 aa15.01□□□□□ -0.01
VARS-216ENST00000428445 ARID1AO14497 2285 aa15□□□□□ -0.01
VARS-216ENST00000428445 TNFSF12-TNFSF13A0A0A6YY99 330 aa15□□□□□ -0.01
VARS-216ENST00000428445 C1orf226A1L170 272 aa15□□□□□ -0.01
VARS-216ENST00000428445 A8MXE2 369 aa15□□□□□ -0.01
VARS-216ENST00000428445 GUCY1B2O75343 617 aa15□□□□□ -0.01
VARS-216ENST00000428445 TNFSF13O75888 250 aa15□□□□□ -0.01
VARS-216ENST00000428445 LY6G6DO95868 133 aa15□□□□□ -0.01
VARS-216ENST00000428445 ATP1B1P05026 303 aa15□□□□□ -0.01
VARS-216ENST00000428445 RBP1P09455 135 aa15□□□□□ -0.01
VARS-216ENST00000428445 CSNK2A2P19784 350 aaPredicted RBP15□□□□□ -0.01
VARS-216ENST00000428445 CASQ1P31415 396 aa15□□□□□ -0.01
VARS-216ENST00000428445 CORO7P57737 925 aa15□□□□□ -0.01
VARS-216ENST00000428445 HMGCS1Q01581 520 aa15□□□□□ -0.01
VARS-216ENST00000428445 IFT88Q13099 833 aa15□□□□□ -0.01
VARS-216ENST00000428445 LETMD1Q6P1Q0 360 aa15□□□□□ -0.01
VARS-216ENST00000428445 ZNF572Q7Z3I7 529 aaPredicted RBP15□□□□□ -0.01
VARS-216ENST00000428445 IFNEQ86WN2 208 aa15□□□□□ -0.01
VARS-216ENST00000428445 CCDC116Q8IYX3 515 aa15□□□□□ -0.01
VARS-216ENST00000428445 KAT2AQ92830 837 aa15□□□□□ -0.01
VARS-216ENST00000428445 WNT2BQ93097 391 aa15□□□□□ -0.01
VARS-216ENST00000428445 CTHRC1Q96CG8 243 aa15□□□□□ -0.01
VARS-216ENST00000428445 ZNF681Q96N22 645 aa15□□□□□ -0.01
VARS-216ENST00000428445 WFIKKN1Q96NZ8 548 aa15□□□□□ -0.01
VARS-216ENST00000428445 ADOQ96SZ5 270 aa15□□□□□ -0.01
VARS-216ENST00000428445 TM9SF2Q99805 663 aa15□□□□□ -0.01
VARS-216ENST00000428445 SFXN3Q9BWM7 321 aa15□□□□□ -0.01
VARS-216ENST00000428445 TSPYL1Q9H0U9 437 aa15□□□□□ -0.01
VARS-216ENST00000428445 XPR1Q9UBH6 696 aa15□□□□□ -0.01
VARS-216ENST00000428445 CFL2Q9Y281 166 aa15□□□□□ -0.01
VARS-216ENST00000428445 FN1P02751 2386 aaKnown RBP15□□□□□ -0.01
VARS-216ENST00000428445 GOLGA6L10A6NI86 522 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 H0YC42 278 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 CASKO14936 926 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 ZIC3O60481 467 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 SMNDC1O75940 238 aaKnown RBP eCLIP14.99□□□□□ -0.014e-7■■■□□ 17.2
VARS-216ENST00000428445 RHOXF2BP0C7M4 288 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 CHN1P15882 459 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 DRD5P21918 477 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 PPICP45877 212 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 SERPINB8P50452 374 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 TPD52P55327 224 aaPredicted RBP14.99□□□□□ -0.01
VARS-216ENST00000428445 CLDN18P56856 261 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 ETF1P62495 437 aaKnown RBP14.99□□□□□ -0.01
VARS-216ENST00000428445 TMEM81Q6P7N7 255 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 VWA1Q6PCB0 445 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 ENPP6Q6UWR7 440 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 PLCZ1Q86YW0 608 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 RELL1Q8IUW5 271 aa14.99□□□□□ -0.01
VARS-216ENST00000428445 GRAMD2AQ8IUY3 354 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms