RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZFP36L2P47974 494 aaKnown RBP16.82■□□□□ 0.28
PSPC1-202ENST00000427943 CCT5P48643 541 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 CDK9P50750 372 aaKnown RBP16.82■□□□□ 0.28
PSPC1-202ENST00000427943 WNT3P56703 355 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 CORO7P57737 925 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 DNAJB13P59910 316 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 DCAF7P61962 342 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 CRYZQ08257 329 aaKnown RBP16.82■□□□□ 0.28
PSPC1-202ENST00000427943 C2orf80Q0P641 193 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 PRSS53Q2L4Q9 553 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 ERCC6LQ2NKX8 1250 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 EIPR1Q53HC9 387 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 CLEC6AQ6EIG7 209 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 LIX1LQ8IVB5 337 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 FAM9CQ8IZT9 166 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 OR2W6PQ8NHA6 318 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 RDH11Q8TC12 318 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 TMBIM1Q969X1 311 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 TREX2Q9BQ50 279 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-202ENST00000427943 ANKZF1Q9H8Y5 726 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 OXSMQ9NWU1 459 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 KLRF1Q9NZS2 232 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 SENP1Q9P0U3 644 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 DOCK7Q96N67 2140 aa16.82■□□□□ 0.28
PSPC1-202ENST00000427943 OTOGQ6ZRI0 2925 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 POLQO75417 2590 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 KDM4EB2RXH2 506 aaPredicted RBP16.81■□□□□ 0.28
PSPC1-202ENST00000427943 CDH16O75309 829 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 ERN1O75460 977 aaKnown RBP16.81■□□□□ 0.28
PSPC1-202ENST00000427943 HPNP05981 417 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 IGFBP2P18065 325 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 PTPN6P29350 595 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 KRTAP10-9P60411 292 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 TLE4Q04727 773 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 WIPI1Q5MNZ9 446 aaPredicted RBP16.81■□□□□ 0.28
PSPC1-202ENST00000427943 LIPMQ5VYY2 423 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 NUP54Q7Z3B4 507 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 SAMD14Q8IZD0 417 aaPredicted RBP16.81■□□□□ 0.28
PSPC1-202ENST00000427943 OR7G2Q8NG99 324 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 OR1J4Q8NGS1 313 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 NTNG2Q96CW9 530 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 BBS4Q96RK4 519 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 MIEF1Q9NQG6 463 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 SIRT5Q9NXA8 310 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 MAPRE3Q9UPY8 281 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 GPR55Q9Y2T6 319 aaPredicted RBP16.81■□□□□ 0.28
PSPC1-202ENST00000427943 PTGDR2Q9Y5Y4 395 aa16.81■□□□□ 0.28
PSPC1-202ENST00000427943 ANKRD17O75179 2603 aaKnown RBP16.8■□□□□ 0.28
PSPC1-202ENST00000427943 TLDC2A0PJX2 215 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 PRAMEF25A6NGN4 478 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 H3BQF6 201 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 SNPHO15079 494 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 TO15178 435 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 ICOSLGO75144 302 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 REM1O75628 298 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 BCAS2O75934 225 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-202ENST00000427943 JUNP05412 331 aaKnown RBP16.8■□□□□ 0.28
PSPC1-202ENST00000427943 DDCP20711 480 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 ELAVL4P26378 380 aaKnown RBP16.8■□□□□ 0.28
PSPC1-202ENST00000427943 GSTM5P46439 218 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 NAA20P61599 178 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 PCLAFQ15004 111 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 CEBPEQ15744 281 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 ACSF3Q4G176 576 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-202ENST00000427943 DCST1Q5T197 706 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 RIPPLY2Q5TAB7 128 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 TIGD3Q6B0B8 471 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 SLC30A6Q6NXT4 461 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 TMEM81Q6P7N7 255 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 NPSR1Q6W5P4 371 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 SEM1Q6ZVN7 128 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 WDR53Q7Z5U6 358 aaPredicted RBP16.8■□□□□ 0.28
PSPC1-202ENST00000427943 C10orf107Q8IVU9 208 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 C14orf79Q96F83 325 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 VSTM2LQ96N03 204 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 COL21A1Q96P44 957 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 BTBD9Q96Q07 612 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 TIMP4Q99727 224 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 FOLH1BQ9HBA9 442 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 MYNNQ9NPC7 610 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 CAMK2AQ9UQM7 478 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 FIS1Q9Y3D6 152 aa16.8■□□□□ 0.28
PSPC1-202ENST00000427943 RSL1D1O76021 490 aaKnown RBP16.79■□□□□ 0.28
PSPC1-202ENST00000427943 HOXD4P09016 255 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-202ENST00000427943 CT45A8P0DMV1 189 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 CT45A9P0DMV2 189 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 UROSP10746 265 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 MPIP34949 423 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 NCBP2P52298 156 aaKnown RBP eCLIP16.79■□□□□ 0.285e-6■□□□□ 8.3
PSPC1-202ENST00000427943 SLC18A2Q05940 514 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 ZNF155Q12901 538 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-202ENST00000427943 CT45A2Q5DJT8 189 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 FAM71E1Q6IPT2 247 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 TRIM46Q7Z4K8 759 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 YRDCQ86U90 279 aaKnown RBP16.79■□□□□ 0.28
PSPC1-202ENST00000427943 FAM83FQ8NEG4 500 aaPredicted RBP16.79■□□□□ 0.28
PSPC1-202ENST00000427943 ERP27Q96DN0 273 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 ADOQ96SZ5 270 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 UGT2B28Q9BY64 529 aa16.79■□□□□ 0.28
PSPC1-202ENST00000427943 SERHLQ9NQF3 203 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms