RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 ZSCAN5CA6NGD5 496 aaPredicted RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 BUB1O43683 1085 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 SDC3O75056 442 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 TGFAP01135 160 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 THY1P04216 161 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 GIG44P09565 113 aaPredicted RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 CCDC192P0DO97 292 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 PRDX2P32119 198 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 RFC2P35250 354 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 MAGEA4P43358 317 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 ATXN3P54252 364 aaPredicted RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 MYBPC1Q00872 1141 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 PAX2Q02962 417 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 SMC1AQ14683 1233 aaKnown RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 CDC37Q16543 378 aaPredicted RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 PPP1R3AQ16821 1122 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 CNPY1Q3B7I2 92 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 CCDC40Q4G0X9 1142 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 IL23RQ5VWK5 629 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 ARFGAP2Q8N6H7 521 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 MRPL43Q8N983 215 aaKnown RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 MINDY2Q8NBR6 621 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 WDR36Q8NI36 951 aaKnown RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 FNDC8Q8TC99 324 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 DQX1Q8TE96 717 aaKnown RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 CCDC47Q96A33 483 aaKnown RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 ZBED6CLQ96FA7 236 aaPredicted RBP3.63□□□□□ -1.83
GCFC2-203ENST00000427862 FAM114A2Q9NRY5 505 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 CUTCQ9NTM9 273 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 RAI14Q9P0K7 980 aa3.63□□□□□ -1.83
GCFC2-203ENST00000427862 TRIM49BA6NDI0 452 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 TRABD2BA6NFA1 517 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 MFSD2BA6NFX1 497 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 PTBP3O95758 552 aaKnown RBP3.62□□□□□ -1.83
GCFC2-203ENST00000427862 MT-ATP6P00846 226 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 SNRPCP09234 159 aaKnown RBP3.62□□□□□ -1.83
GCFC2-203ENST00000427862 PVRP15151 417 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 GAP43P17677 238 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 FUT1P19526 365 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 FASP25445 335 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 GABPB1Q06547 395 aaPredicted RBP3.62□□□□□ -1.83
GCFC2-203ENST00000427862 NME3Q13232 169 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 PDIA5Q14554 519 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 TIMM50Q3ZCQ8 353 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 ATAD3CQ5T2N8 411 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 PRR5LQ6MZQ0 368 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 CGB2Q6NT52 195 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 OLFM4Q6UX06 510 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 VITQ6UXI7 678 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 GOLGA7Q7Z5G4 137 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 SERINC5Q86VE9 423 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 GPBP1Q86WP2 473 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 RNF148Q8N7C7 305 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 KLHL30-AS1Q8NEE0 82 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 OR52J3Q8NH60 311 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 RHOXF1Q8NHV9 184 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 DNAJA3Q96EY1 480 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 C11orf24Q96F05 449 aaPredicted RBP3.62□□□□□ -1.83
GCFC2-203ENST00000427862 SAMD8Q96LT4 415 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 SOHLH2Q9NX45 425 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.62□□□□□ -1.83
GCFC2-203ENST00000427862 PRODH2Q9UF12 536 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 Q9UF83 564 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 FZR1Q9UM11 496 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 NAALAD2Q9Y3Q0 740 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 METP08581 1390 aa3.62□□□□□ -1.83
GCFC2-203ENST00000427862 LRIT2A6NDA9 550 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 CFLARO15519 480 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 RHBDL1O75783 438 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 GSTA1P08263 222 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 UMPSP11172 480 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 LAMP1P11279 417 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 IDSP22304 550 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 IGFBP5P24593 272 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 NUMBP49757 651 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 IL1RL1Q01638 556 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 TGIF1Q15583 401 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 ZIC1Q15915 447 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 KRT71Q3SY84 523 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 ISLR2Q6UXK2 745 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 PAQR9Q6ZVX9 377 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 CCDC36Q8IYA8 594 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 KDM8Q8N371 416 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 ZPLD1Q8TCW7 415 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 GTSF1Q8WW33 167 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 NACA2Q9H009 215 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 ATG10Q9H0Y0 220 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 PRR34Q9NV39 138 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 PIN4Q9Y237 131 aaKnown RBP3.61□□□□□ -1.83
GCFC2-203ENST00000427862 FKBP7Q9Y680 259 aa3.61□□□□□ -1.83
GCFC2-203ENST00000427862 HCFC1P51610 2035 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 KRT87PA6NCN2 255 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 E9PMD0 336 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 SGK494L7N484 410 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 CCNA2P20248 432 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 PTPN6P29350 595 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 OR1D4P47884 311 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 RPL34P49207 117 aaKnown RBP3.6□□□□□ -1.83
GCFC2-203ENST00000427862 SLC26A5P58743 744 aa3.6□□□□□ -1.83
GCFC2-203ENST00000427862 SPP2Q13103 211 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms