RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 HIF3AQ9Y2N7 669 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 PIAS3Q9Y6X2 628 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 EEF1E1-BLOC1S5C9J1V9 151 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 H3BUI4 141 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 HMGCLP35914 325 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 RABIFP47224 123 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 GRM7Q14831 915 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 NDUFAF5Q5TEU4 345 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 CFAP77Q6ZQR2 320 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 TP53INP2Q8IXH6 220 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 DNAJB5O75953 348 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 PPP1R3DO95685 299 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 THEGLP0DJG4 465 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 IL7P13232 177 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 RBMS1P29558 406 aaKnown RBP17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 ERVPABLB-1P60509 514 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 CTXN1P60606 82 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 PPA1Q15181 289 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 ZNF551Q7Z340 670 aaPredicted RBP17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 TRIM73Q86UV7 250 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 UEVLDQ8IX04 471 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 NRMQ8IXM6 262 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 OR52N2Q8NGI0 321 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 ACTR6Q9GZN1 396 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 KCNIP1Q9NZI2 227 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 DNAJC15Q9Y5T4 150 aa17.06■□□□□ 0.32
ARHGEF28-203ENST00000426542 SOX9P48436 509 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 TMEM130Q8N3G9 435 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 IQCF1Q8N6M8 205 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 OR2T4Q8NH00 348 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 FUBP1Q96AE4 644 aaKnown RBP17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 L3HYPDHQ96EM0 354 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 SCRN2Q96FV2 425 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 FEVQ99581 238 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 C5AR2Q9P296 337 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 PRAMEF2O60811 474 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 LAMP1P11279 417 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 SLC2A5P22732 501 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 DNASE1P24855 282 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 SNTB2Q13425 540 aaKnown RBP17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 AADACL4Q5VUY2 407 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 MTG2Q9H4K7 406 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 MTHFD2LQ9H903 347 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 H7C2Y5 167 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 FMO6PO60774 539 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 SUOXP51687 545 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 NTRK2Q16620 822 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 COMMD6Q7Z4G1 85 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 CIDECQ96AQ7 238 aaPredicted RBP17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 OR4K3Q96R72 315 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 INPP5KQ9BT40 448 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 ACTL7AQ9Y615 435 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 PRKYO43930 277 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 MTNR1AP48039 350 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 GABARAPL2P60520 117 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 KIAA0895LQ68EN5 471 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 COMTD1Q86VU5 262 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 OR5AK2Q8NH90 309 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 SLC1A7O00341 560 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 ZNF623O75123 536 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 PITPNBP48739 271 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 GRIN2CQ14957 1233 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 SLC39A5Q6ZMH5 540 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 SLC16A9Q7RTY1 509 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 RCBTB1Q8NDN9 531 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 FIBINQ8TAL6 211 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 TCEAL4Q96EI5 215 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 PELI2Q9HAT8 420 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 CD93Q9NPY3 652 aa17.05■□□□□ 0.32
ARHGEF28-203ENST00000426542 RAB3BP20337 219 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 MAP4K2Q12851 820 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 SFRP4Q6FHJ7 346 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 MARVELD2Q8N4S9 558 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 ARHGAP39Q9C0H5 1083 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 ACOT7O00154 380 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 IFNA1P01562 189 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 GSG1LQ6UXU4 331 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 FAM217AQ8IXS0 508 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 CHCHD4Q8N4Q1 142 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 MSANTD3Q96H12 275 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 AP1S3Q96PC3 154 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 HINT2Q9BX68 163 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 EBF1Q9UH73 591 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 YARS2Q9Y2Z4 477 aaKnown RBP17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 LMO7Q8WWI1 1683 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 GRXCR2A6NFK2 248 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 FOXD2O60548 495 aaPredicted RBP17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 FGL1Q08830 312 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 MFSD13AQ14CX5 517 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 NETO1Q8TDF5 533 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 LMF1Q96S06 567 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 ARL6Q9H0F7 186 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 ABCG5Q9H222 651 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 IGSF5Q9NSI5 407 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 MYEF2Q9P2K5 600 aaKnown RBP17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 WDR37Q9Y2I8 494 aa17.04■□□□□ 0.32
ARHGEF28-203ENST00000426542 FMN2Q9NZ56 1722 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms