RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 LIMS3P0CW19 117 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 LIMS4P0CW20 117 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 ARAFP10398 606 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 VIPR1P32241 457 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 SLC6A11P48066 632 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 NTRK2Q16620 822 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 ZNF630Q2M218 657 aaPredicted RBP12.72□□□□□ -0.37
LRCH3-203ENST00000425562 MEDAGQ5VYS4 303 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 KIF18BQ86Y91 864 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 GPR135Q8IZ08 494 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 CHCHD4Q8N4Q1 142 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 DNAJA4Q8WW22 397 aaPredicted RBP12.72□□□□□ -0.37
LRCH3-203ENST00000425562 VOPP1Q96AW1 172 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 SCRN2Q96FV2 425 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 THAP7Q9BT49 309 aaPredicted RBP12.72□□□□□ -0.37
LRCH3-203ENST00000425562 FNDC11Q9BVV2 318 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 ISG20L2Q9H9L3 353 aaKnown RBP12.72□□□□□ -0.37
LRCH3-203ENST00000425562 MRPL17Q9NRX2 175 aaKnown RBP12.72□□□□□ -0.37
LRCH3-203ENST00000425562 IMP3Q9NV31 184 aaKnown RBP12.72□□□□□ -0.37
LRCH3-203ENST00000425562 B3GNT2Q9NY97 397 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 GULP1Q9UBP9 304 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 SRRDQ9UH36 339 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 NTNG1Q9Y2I2 539 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 CSNK1G3Q9Y6M4 447 aa12.72□□□□□ -0.37
LRCH3-203ENST00000425562 NEDD8-MDP1E9PL57 170 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 SHOXO15266 292 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 PDPK1O15530 556 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 SSNA1O43805 119 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 DPM1O60762 260 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 PRKRAO75569 313 aaKnown RBP12.71□□□□□ -0.37
LRCH3-203ENST00000425562 EIF4EP06730 217 aaKnown RBP12.71□□□□□ -0.37
LRCH3-203ENST00000425562 HSD3B1P14060 373 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 PTX3P26022 381 aaPredicted RBP12.71□□□□□ -0.37
LRCH3-203ENST00000425562 MTNR1AP48039 350 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 TM4SF4P48230 202 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 HMGA2P52926 109 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 SLC16A1P53985 500 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 COX10Q12887 443 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 HSD11B1LQ7Z5J1 315 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 TMEM25Q86YD3 366 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 OVCA2Q8WZ82 227 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 TMEM159Q96B96 161 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 IL21Q9HBE4 155 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 FZD3Q9NPG1 666 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 NLGN3Q9NZ94 848 aa12.71□□□□□ -0.37
LRCH3-203ENST00000425562 DIMT1Q9UNQ2 313 aaKnown RBP12.71□□□□□ -0.37
LRCH3-203ENST00000425562 SF3B6Q9Y3B4 125 aaKnown RBP12.71□□□□□ -0.37
LRCH3-203ENST00000425562 GFYI3L273 518 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 LGALS8O00214 317 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 HCN1O60741 890 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 GPR37L1O60883 481 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 C12orf73Q69YU5 71 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 MED27Q6P2C8 311 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 KIAA1324Q6UXG2 1013 aaKnown RBP12.71□□□□□ -0.38
LRCH3-203ENST00000425562 Q6ZNB5 142 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 QSOX2Q6ZRP7 698 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 DUSP18Q8NEJ0 188 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 SPRYD4Q8WW59 207 aaPredicted RBP12.71□□□□□ -0.38
LRCH3-203ENST00000425562 FCRL4Q96PJ5 515 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 TMEM175Q9BSA9 504 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 MED20Q9H944 212 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 ZC4H2Q9NQZ6 224 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 TDP1Q9NUW8 608 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 CXXC1Q9P0U4 656 aaPredicted RBP12.71□□□□□ -0.38
LRCH3-203ENST00000425562 TAAR2Q9P1P5 351 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 LSM7Q9UK45 103 aaKnown RBP12.71□□□□□ -0.38
LRCH3-203ENST00000425562 DSPPQ9NZW4 1301 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 PLXNB3Q9ULL4 1909 aa12.71□□□□□ -0.38
LRCH3-203ENST00000425562 ALPK2Q86TB3 2170 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 SLC43A1O75387 559 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 SOD1P00441 154 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 SHC1P29353 583 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 MAP2K6P52564 334 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 PCBP3P57721 371 aaKnown RBP12.7□□□□□ -0.38
LRCH3-203ENST00000425562 STXBP1P61764 594 aaKnown RBP12.7□□□□□ -0.38
LRCH3-203ENST00000425562 SNRPD1P62314 119 aaKnown RBP12.7□□□□□ -0.38
LRCH3-203ENST00000425562 TBPL1P62380 186 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 GALEQ14376 348 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 SF3A2Q15428 464 aaKnown RBP12.7□□□□□ -0.38
LRCH3-203ENST00000425562 C22orf39Q6P5X5 142 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 SMARCD3Q6STE5 483 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 LIPIQ6XZB0 460 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 RNF165Q6ZSG1 346 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 CRIPAKQ8N1N5 446 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 TMEM163Q8TC26 289 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 HCFC1R1Q9NWW0 138 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 FBXO9Q9UK97 447 aaPredicted RBP12.7□□□□□ -0.38
LRCH3-203ENST00000425562 KCNE2Q9Y6J6 123 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 PROM1O43490 865 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 B4GALT2O60909 372 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 ARHGEF15O94989 841 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 MT-ND4P03905 459 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 ICAM2P13598 275 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 NUDT1P36639 197 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 SPINT3P49223 89 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 TIGD3Q6B0B8 471 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 GRHL2Q6ISB3 625 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 LYPD4Q6UWN0 246 aa12.7□□□□□ -0.38
LRCH3-203ENST00000425562 ZNF783Q6ZMS7 281 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms