RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 SCARB1Q8WTV0 552 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 C11orf24Q96F05 449 aaPredicted RBP12.47□□□□□ -0.41
CALD1-205ENST00000422748 PTPN18Q99952 460 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 BTNL2Q9UIR0 455 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 CHST2Q9Y4C5 530 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 PCDHGC4Q9Y5F7 938 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 SCAMP2O15127 329 aaKnown RBP12.47□□□□□ -0.41
CALD1-205ENST00000422748 B4GALT3O60512 393 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 SIX6O95475 246 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 TFP02787 698 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 IFNW1P05000 195 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 PEPDP12955 493 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 UGT2B7P16662 529 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 CELP19835 753 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 RFX3P48380 749 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 MAPKAPK2P49137 400 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 MLLT1Q03111 559 aaPredicted RBP12.47□□□□□ -0.41
CALD1-205ENST00000422748 FGL1Q08830 312 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 CPTPQ5TA50 214 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 Q6ZTK2 550 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 TMPRSS9Q7Z410 1059 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 TRMT11Q7Z4G4 463 aaKnown RBP12.47□□□□□ -0.41
CALD1-205ENST00000422748 LHFPL3Q86UP9 236 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 WDR20Q8TBZ3 569 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 ADAMTS19Q8TE59 1207 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 TMEM40Q8WWA1 233 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 ACOT12Q8WYK0 555 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 NSMAFQ92636 917 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 RNFT2Q96EX2 444 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 RRAGCQ9HB90 399 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 PDFQ9HBH1 243 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 NKIRAS2Q9NYR9 191 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 CTSFQ9UBX1 484 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 ACSL6Q9UKU0 697 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 PCDHB1Q9Y5F3 818 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 TRPM7Q96QT4 1865 aa12.47□□□□□ -0.41
CALD1-205ENST00000422748 GSAPA4D1B5 854 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 CHURC1-FNTBB4DL54 471 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 D6RAR5 112 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 PRAMEF4O60810 478 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 SOX30O94993 753 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 MT-ND4P03905 459 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 HLA-DPB1P04440 258 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 LIMS3P0CW19 117 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 LIMS4P0CW20 117 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 PCSK1P29120 753 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 RBMS1P29558 406 aaKnown RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 ZXDCQ2QGD7 858 aaPredicted RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 ATP13A5Q4VNC0 1218 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 PRAMEF9Q5VWM5 478 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 SPRYD7Q5W111 196 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 OAFQ86UD1 273 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 LRRTM3Q86VH5 581 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 RPLP0P6Q8NHW5 317 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 MYEOVQ96EZ4 313 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 MGME1Q9BQP7 344 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 TMEM121BQ9BXQ6 578 aaPredicted RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 KCND3Q9UK17 655 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 PLCL2Q9UPR0 1127 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 ZFR2Q9UPR6 939 aaKnown RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 NINQ8N4C6 2090 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 YKT6O15498 198 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 SMAD6O43541 496 aaKnown RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 ACSL1P33121 698 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 CDK6Q00534 326 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 DHODHQ02127 395 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 TAP2Q03519 686 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 PUM1Q14671 1186 aaKnown RBP eCLIP12.46□□□□□ -0.41
CALD1-205ENST00000422748 HLXQ14774 488 aaPredicted RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 UAP1L1Q3KQV9 507 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 SPOUT1Q5T280 376 aaKnown RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 FRG2Q64ET8 278 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 TAPT1Q6NXT6 567 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 SEZ6L2Q6UXD5 910 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 ASPGQ86U10 573 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 MCATQ8IVS2 390 aaKnown RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 CDH26Q8IXH8 852 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 ZDHHC1Q8WTX9 485 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 CHFRQ96EP1 664 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 FUBP3Q96I24 572 aaKnown RBP eCLIP12.46□□□□□ -0.41
CALD1-205ENST00000422748 FRG2BQ96QU4 278 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 ADGRE3Q9BY15 652 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 POLDIP3Q9BY77 421 aaKnown RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 KATNBL1Q9H079 304 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 C11orf49Q9H6J7 331 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 CAPN10Q9HC96 672 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 CFAP97Q9P2B7 532 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 AFF4Q9UHB7 1163 aaKnown RBP12.46□□□□□ -0.41
CALD1-205ENST00000422748 KCNK7Q9Y2U2 307 aa12.46□□□□□ -0.41
CALD1-205ENST00000422748 IGLV3-10A0A075B6K4 115 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 A0A0D9SEW6 157 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 MEIS3P2A8K0S8 358 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 RFXAPO00287 272 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 SH3BGRLO75368 114 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 ANXA5P08758 320 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 ALPIP09923 528 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 ANKRD34CP0C6C1 535 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 ACP2P11117 423 aa12.45□□□□□ -0.42
CALD1-205ENST00000422748 JUPP14923 745 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms