RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 SLC35C2Q9NQQ7 365 aa23.32■■□□□ 1.32
SMDT1-202ENST00000422252 EHD3Q9NZN3 535 aa23.32■■□□□ 1.32
SMDT1-202ENST00000422252 GPR55Q9Y2T6 319 aaPredicted RBP23.32■■□□□ 1.32
SMDT1-202ENST00000422252 SMIM23A6NLE4 172 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 AHRRA9YTQ3 701 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 PTPN6P29350 595 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 DNAJB13P59910 316 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 KRTAP10-9P60411 292 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 SNTA1Q13424 505 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 TOMM20Q15388 145 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 ANGPTL8Q6UXH0 198 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 RDH11Q8TC12 318 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 OSBPL11Q9BXB4 747 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 ANKRA2Q9H9E1 313 aa23.31■■□□□ 1.32
SMDT1-202ENST00000422252 ICOSLGO75144 302 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 UGT2B11O75310 529 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 CRCPO75575 148 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 CAPN3P20807 821 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 PTGDSP41222 190 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 ZNF763Q0D2J5 394 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 IMPG1Q17R60 797 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 ERCC6LQ2NKX8 1250 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 SLC25A35Q3KQZ1 300 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 CFAP157Q5JU67 520 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 LIX1LQ8IVB5 337 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 CLYBLQ8N0X4 340 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 BTBD9Q96Q07 612 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 KLRF1Q9NZS2 232 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 SLC6A5Q9Y345 797 aa23.3■■□□□ 1.32
SMDT1-202ENST00000422252 OTOGQ6ZRI0 2925 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 COPEO14579 308 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 SNPHO15079 494 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 DDCP20711 480 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 MPIP34949 423 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 C2orf80Q0P641 193 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 EIPR1Q53HC9 387 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 NHSL2Q5HYW2 709 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 VASNQ6EMK4 673 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 SEM1Q6ZVN7 128 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 TRIM46Q7Z4K8 759 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 PM20D2Q8IYS1 436 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 FAM9CQ8IZT9 166 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 CCDC63Q8NA47 563 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 CDC26Q8NHZ8 85 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 EPS8L3Q8TE67 593 aaKnown RBP23.29■■□□□ 1.32
SMDT1-202ENST00000422252 TMBIM1Q969X1 311 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 COL21A1Q96P44 957 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 BBS4Q96RK4 519 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 PRDM14Q9GZV8 571 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 C12orf65Q9H3J6 166 aaKnown RBP23.29■■□□□ 1.32
SMDT1-202ENST00000422252 L2HGDHQ9H9P8 463 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 GALNT9Q9HCQ5 603 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 OXSMQ9NWU1 459 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 SENP1Q9P0U3 644 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 FREM3P0C091 2139 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 TACC2O95359 2948 aa23.29■■□□□ 1.32
SMDT1-202ENST00000422252 PRAMEF25A6NGN4 478 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 OR6C70A6NIJ9 312 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 HSPB2A8KAH6 182 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 PLOD3O60568 738 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 EPPINO95925 133 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 CT45A8P0DMV1 189 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 CT45A9P0DMV2 189 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 CPA3P15088 417 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 HSPB2Q16082 182 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 ACSF3Q4G176 576 aaPredicted RBP23.28■■□□□ 1.32
SMDT1-202ENST00000422252 CT45A2Q5DJT8 189 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 WIPI1Q5MNZ9 446 aaPredicted RBP23.28■■□□□ 1.32
SMDT1-202ENST00000422252 WDR53Q7Z5U6 358 aaPredicted RBP23.28■■□□□ 1.32
SMDT1-202ENST00000422252 FAM83FQ8NEG4 500 aaPredicted RBP23.28■■□□□ 1.32
SMDT1-202ENST00000422252 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.28■■□□□ 1.322e-7■■■■■ 32.7
SMDT1-202ENST00000422252 TMCO6Q96DC7 493 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 VSTM2LQ96N03 204 aa23.28■■□□□ 1.32
SMDT1-202ENST00000422252 INTS1Q8N201 2190 aaKnown RBP23.28■■□□□ 1.32
SMDT1-202ENST00000422252 C2orf72A6NCS6 295 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 MYO1GB0I1T2 1018 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 ABCB7O75027 752 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 ERN1O75460 977 aaKnown RBP23.27■■□□□ 1.32
SMDT1-202ENST00000422252 REM1O75628 298 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 RSL1D1O76021 490 aaKnown RBP23.27■■□□□ 1.32
SMDT1-202ENST00000422252 BMP7P18075 431 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 KRT4P19013 534 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 CORO7P57737 925 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 PSPHP78330 225 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 SF3B4Q15427 424 aaKnown RBP eCLIP23.27■■□□□ 1.32
SMDT1-202ENST00000422252 FAM71E1Q6IPT2 247 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 OR7G2Q8NG99 324 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 FAM76AQ8TAV0 307 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 SLC35A4Q96G79 324 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 UGT2B28Q9BY64 529 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 STMN4Q9H169 189 aaPredicted RBP23.27■■□□□ 1.32
SMDT1-202ENST00000422252 FOLH1BQ9HBA9 442 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 SLC24A3Q9HC58 644 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 TNFRSF12AQ9NP84 129 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 RRAGDQ9NQL2 400 aaPredicted RBP23.27■■□□□ 1.32
SMDT1-202ENST00000422252 EXO1Q9UQ84 846 aaKnown RBP23.27■■□□□ 1.32
SMDT1-202ENST00000422252 CAMK2AQ9UQM7 478 aa23.27■■□□□ 1.32
SMDT1-202ENST00000422252 POLR3HQ9Y535 204 aaPredicted RBP23.27■■□□□ 1.32
SMDT1-202ENST00000422252 NME6O75414 186 aaPredicted RBP23.26■■□□□ 1.31
SMDT1-202ENST00000422252 UROSP10746 265 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms