RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PCYT1AP49585 367 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 LHX2P50458 406 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 CCNG1P51959 295 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 MAPK12P53778 367 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 PLTPP55058 493 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 CAV1Q03135 178 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 TTC19Q6DKK2 380 aaPredicted RBP15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 PLXDC2Q6UX71 529 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 CCDC25Q86WR0 208 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 PLCZ1Q86YW0 608 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 P3H2Q8IVL5 708 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 GCNT2Q8N0V5 402 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 METTL4Q8N3J2 472 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 RDH11Q8TC12 318 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 ZNF592Q92610 1267 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 PIGTQ969N2 578 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 TMCO6Q96DC7 493 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 TAS2R10Q9NYW0 307 aa15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 MRPS18CQ9Y3D5 142 aaKnown RBP15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 NSD1Q96L73 2696 aaPredicted RBP15.3■□□□□ 0.04
UPF3AP3-201ENST00000420996 A0A096LPK6 155 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 PLOD2O00469 737 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 MSTNO14793 375 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 TO15178 435 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 SMPD2O60906 423 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 ERAL1O75616 437 aaKnown RBP15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 TNFSF13O75888 250 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 CBX7O95931 251 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 SRD5A2P31213 254 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 FEN1P39748 380 aaKnown RBP15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 STARP49675 285 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 EMDP50402 254 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 HMGCS1Q01581 520 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 IFT88Q13099 833 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 Q5PR19 223 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 AAGABQ6PD74 315 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 GRAMD2AQ8IUY3 354 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 PTGR2Q8N8N7 351 aaPredicted RBP15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 SIMC1Q8NDZ2 872 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 ADCY4Q8NFM4 1077 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 DTNBP1Q96EV8 351 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 COX4I2Q96KJ9 171 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 LRRC1Q9BTT6 524 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 EHD3Q9NZN3 535 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 PRODH2Q9UF12 536 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 PSME2Q9UL46 239 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 DLGAP4Q9Y2H0 992 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 PLLPQ9Y342 182 aa15.29■□□□□ 0.04
UPF3AP3-201ENST00000420996 A0A1W2PNV4 684 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 FRG2CA6NGY1 282 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 OR6C70A6NIJ9 312 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 CTIFO43310 598 aaKnown RBP15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 HCRTR2O43614 444 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 ABCB7O75027 752 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 CRHP06850 196 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 ZNF708P17019 499 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 CLDN18P56856 261 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 GUCY2DQ02846 1103 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 FAM27E3Q08E93 113 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 TRAF3Q13114 568 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 TRMT12Q53H54 448 aaKnown RBP15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 TECRLQ5HYJ1 363 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 PRSS57Q6UWY2 283 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 COMMD6Q7Z4G1 85 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 SPATA4Q8NEY3 305 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 OR52R1Q8NGF1 315 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 FBXO25Q8TCJ0 367 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 NUDT8Q8WV74 236 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 TM4SF18Q96CE8 201 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 COL21A1Q96P44 957 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 ZBTB26Q9HCK0 441 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 TMCO1Q9UM00 188 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 SLC12A4Q9UP95 1085 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 GPR55Q9Y2T6 319 aaPredicted RBP15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 UTP11Q9Y3A2 253 aaKnown RBP15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 FN1P02751 2386 aaKnown RBP15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 ARID1AO14497 2285 aa15.28■□□□□ 0.04
UPF3AP3-201ENST00000420996 DNHD1Q96M86 4753 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 STX16-NPEPL1H3BU86 382 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 H7C1Q1 480 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 STX16O14662 325 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 REM1O75628 298 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 TGM6O95932 706 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 TYK2P29597 1187 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 CPOXP36551 454 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 MC3RP41968 323 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 DUSP2Q05923 314 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 BCL2A1Q16548 175 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 GGTA1PQ4G0N0 100 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 SGO1Q5FBB7 561 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 TMBIM1Q969X1 311 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 KLHL29Q96CT2 875 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 STARD4Q96DR4 205 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 MRRFQ96E11 262 aaKnown RBP15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 PHF21BQ96EK2 531 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 SLC35A4Q96G79 324 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 ZNF681Q96N22 645 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 SFXN2Q96NB2 322 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 WFIKKN1Q96NZ8 548 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms