RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 MVB12AQ96EY5 273 aa19.58■□□□□ 0.72
GPC1-202ENST00000420138 RDH12Q96NR8 316 aa19.58■□□□□ 0.72
GPC1-202ENST00000420138 TRNT1Q96Q11 434 aaKnown RBP19.58■□□□□ 0.72
GPC1-202ENST00000420138 RBM4BQ9BQ04 359 aaKnown RBP19.58■□□□□ 0.72
GPC1-202ENST00000420138 RBM4Q9BWF3 364 aaKnown RBP19.58■□□□□ 0.72
GPC1-202ENST00000420138 PRTFDC1Q9NRG1 225 aa19.58■□□□□ 0.72
GPC1-202ENST00000420138 FGF21Q9NSA1 209 aa19.58■□□□□ 0.72
GPC1-202ENST00000420138 IFT80Q9P2H3 777 aaPredicted RBP19.58■□□□□ 0.72
GPC1-202ENST00000420138 DHCR7Q9UBM7 475 aaKnown RBP19.58■□□□□ 0.72
GPC1-202ENST00000420138 LIPT1Q9Y234 373 aa19.58■□□□□ 0.72
GPC1-202ENST00000420138 SAMHD1Q9Y3Z3 626 aaKnown RBP19.58■□□□□ 0.72
GPC1-202ENST00000420138 SPTBP11277 2137 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 A0A0G2JPF8 293 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 HNRNPCL2B2RXH8 293 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 HNRNPCL3B7ZW38 293 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 J3KTA2 159 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 SEMA7AO75326 666 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 HNRNPCL4P0DMR1 293 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 CKMT1AP12532 417 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 FUT4P22083 530 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 RRM2P31350 389 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 YAP1P46937 504 aaKnown RBP19.57■□□□□ 0.72
GPC1-202ENST00000420138 TUBA4AP68366 448 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 EXOSC7Q15024 291 aaKnown RBP19.57■□□□□ 0.72
GPC1-202ENST00000420138 MED25Q71SY5 747 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 ZNF605Q86T29 641 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 ZNF786Q8N393 782 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 OR4D11Q8NGI4 311 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 NAT6Q93015 286 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 NRBF2Q96F24 287 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 ZNF347Q96SE7 839 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 EPYCQ99645 322 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 BTBD2Q9BX70 525 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 LRRN3Q9H3W5 708 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 REEP1Q9H902 201 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 CXorf21Q9HAI6 301 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 ADAP2Q9NPF8 381 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 LANCL2Q9NS86 450 aa19.57■□□□□ 0.72
GPC1-202ENST00000420138 MRPS33Q9Y291 106 aaKnown RBP19.57■□□□□ 0.72
GPC1-202ENST00000420138 DUXAA6NLW8 204 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 SERPINB7O75635 380 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 DNAJB5O75953 348 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 THRBP10828 461 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 MAOAP21397 527 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 OR1D4P47884 311 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 KCNC4Q03721 635 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 CHRNEQ04844 493 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 GNA13Q14344 377 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 GPAT3Q53EU6 434 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 CYP4Z1Q86W10 505 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 OR4D9Q8NGE8 314 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 OR4C15Q8NGM1 316 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 HOXB13Q92826 284 aaPredicted RBP19.56■□□□□ 0.72
GPC1-202ENST00000420138 CDS1Q92903 461 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 ZG16BQ96DA0 208 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 QRSL1Q9H0R6 528 aaKnown RBP19.56■□□□□ 0.72
GPC1-202ENST00000420138 SEC14L3Q9UDX4 400 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 LYVE1Q9Y5Y7 322 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 ENPP4Q9Y6X5 453 aa19.56■□□□□ 0.72
GPC1-202ENST00000420138 IGHV5-10-1A0A0J9YXX1 117 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 LNP1A1A4G5 178 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 FCMRO60667 390 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 OR6B1O95007 311 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 ALAS2P22557 587 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 PDX1P52945 283 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 HSD17B7P56937 341 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 ZIK1Q3SY52 487 aaPredicted RBP19.55■□□□□ 0.72
GPC1-202ENST00000420138 HMGN2P46Q86SG4 172 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 KRT73Q86Y46 540 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 RASSF5Q8WWW0 418 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 SLC9A6Q92581 669 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 ZNF354BQ96LW1 612 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 MBOAT4Q96T53 435 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 ALOXE3Q9BYJ1 711 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 PIGUQ9H490 435 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 EXD2Q9NVH0 621 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 TUBA8Q9NY65 449 aaPredicted RBP19.55■□□□□ 0.72
GPC1-202ENST00000420138 TESMINQ9Y4I5 508 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 PCDHGB3Q9Y5G1 929 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 ADAMTS20P59510 1910 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 A8MVJ9 347 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 CLDN4O14493 209 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 FFAR1O14842 300 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 OR10H2O60403 315 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 CLIC3O95833 236 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 ITGA2P17301 1181 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 DAPP51397 102 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 STX4Q12846 297 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 EPS8Q12929 822 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 RBM44Q6ZP01 1051 aaKnown RBP19.55■□□□□ 0.72
GPC1-202ENST00000420138 LACC1Q8IV20 430 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 GPR135Q8IZ08 494 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 VWA5B2Q8N398 1253 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 RCBTB1Q8NDN9 531 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 IFI44Q8TCB0 444 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 TOR3AQ9H497 397 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 NECTIN3Q9NQS3 549 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 SERTAD3Q9UJW9 196 aa19.55■□□□□ 0.72
GPC1-202ENST00000420138 HRKO00198 91 aa19.54■□□□□ 0.72
GPC1-202ENST00000420138 AHCYL1O43865 530 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms